RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 CLIC4Q9Y696 253 aa28.81■■■□□ 2.2
PPFIA3-205ENST00000602509 K7ELQ4 463 aaPredicted RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 MAPTP10636 758 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 HARSP12081 509 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 PLCG1P19174 1290 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 ZXDAP98168 799 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 GRIN1Q05586 938 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 KARSQ15046 597 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 FAM171A1Q5VUB5 890 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 CEP57Q86XR8 500 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 TDRD5Q8NAT2 981 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 ACAP3Q96P50 834 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 PPP1R10Q96QC0 940 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 TTPALQ9BTX7 342 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 ODF2LQ9ULJ1 636 aa28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 TDRD15B5MCY1 1934 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-205ENST00000602509 C2CD4DB7Z1M9 353 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 KRT18P05783 430 aaKnown RBP28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 PROZP22891 400 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 PTPN21Q16825 1174 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 C15orf39Q6ZRI6 1047 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 GLYCTKQ8IVS8 523 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 UROC1Q96N76 676 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 ANKFY1Q9P2R3 1169 aa28.79■■■□□ 2.2
PPFIA3-205ENST00000602509 SMIM28A0A1B0GU29 152 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 TOM1L1O75674 476 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 B3GAT3O94766 335 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 BRD1O95696 1058 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 C1RP00736 705 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 SPATA31D3P0C874 917 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 MYBP10242 640 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 RESTQ13127 1097 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 MCM6Q14566 821 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 RTP2Q5QGT7 225 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 DCLRE1AQ6PJP8 1040 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 PRSS55Q6UWB4 352 aaPredicted RBP28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 TRIM67Q6ZTA4 783 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 SPATA31D4Q6ZUB0 917 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 CMASQ8NFW8 434 aaPredicted RBP28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 HDAC7Q8WUI4 952 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 RAD54LQ92698 747 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 BICD1Q96G01 975 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 REEP2Q9BRK0 252 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 BLOC1S4Q9NUP1 217 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 SLC38A7Q9NVC3 462 aa28.78■■■□□ 2.2
PPFIA3-205ENST00000602509 CCDC195A0A1B0GUA6 201 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 FAM13AO94988 1023 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 RPL17P18621 184 aaKnown RBP28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 MARCKSP29966 332 aaPredicted RBP28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 MATR3P43243 847 aaKnown RBP eCLIP28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 NOLC1Q14978 699 aaKnown RBP eCLIP28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 PDXDC1Q6P996 788 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 ZPBP2Q6X784 338 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 CCDC149Q6ZUS6 474 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 PLCD3Q8N3E9 789 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 MYCT1Q8N699 235 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 ZBTB45Q96K62 511 aaPredicted RBP28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 PLEKHA4Q9H4M7 779 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 USTQ9Y2C2 406 aa28.77■■■□□ 2.2
PPFIA3-205ENST00000602509 TMEM221A6NGB7 291 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 M0R296 226 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 TGM5O43548 720 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 CLCNKBP51801 687 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 NCKAP1LP55160 1127 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 CEBPZQ03701 1054 aaKnown RBP28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 PTPAQ15257 358 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 XKR4Q5GH76 650 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 FAM173BQ6P4H8 233 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 ALKAL1Q6UXT8 129 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 CYP26C1Q6V0L0 522 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 HFE2Q6ZVN8 426 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 HAUS6Q7Z4H7 955 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 PIK3R5Q8WYR1 880 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 ACSF2Q96CM8 615 aaPredicted RBP28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 SNX27Q96L92 541 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 MFSD14AQ96MC6 490 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 CCSER1Q9C0I3 900 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 ZHX3Q9H4I2 956 aa28.76■■■□□ 2.19
PPFIA3-205ENST00000602509 TMEM189-UBE2V1I3L0A0 370 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 ABLIM1O14639 778 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 CLDN3O15551 220 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 TRAPPC3O43617 180 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 TBCAO75347 108 aaKnown RBP28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 SCP2P22307 547 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 PSMD5Q16401 504 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 UPP1Q16831 310 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 ZDHHC14Q8IZN3 488 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 FEZF2Q8TBJ5 459 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 LRRC15Q8TF66 581 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 DDX27Q96GQ7 796 aaKnown RBP28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 PARVGQ9HBI0 331 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 GOLGA2P5Q9HBQ8 144 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 CCDC39Q9UFE4 941 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 MTMR6Q9Y217 621 aa28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 ARIH1Q9Y4X5 557 aaPredicted RBP28.75■■■□□ 2.19
PPFIA3-205ENST00000602509 KCNE1P15382 129 aa28.74■■■□□ 2.19
PPFIA3-205ENST00000602509 DDIT3P35638 169 aa28.74■■■□□ 2.19
PPFIA3-205ENST00000602509 SPECC1Q5M775 1068 aa28.74■■■□□ 2.19
PPFIA3-205ENST00000602509 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.74■■■□□ 2.19
PPFIA3-205ENST00000602509 OTOP3Q7RTS5 596 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms