RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 KRT79Q5XKE5 535 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.37□□□□□ -0.43
VAMP7-206ENST00000488344 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 ZNF707Q96C28 371 aaPredicted RBP12.37□□□□□ -0.43
VAMP7-206ENST00000488344 DRC1Q96MC2 740 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 WNT16Q9UBV4 365 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 DNM3Q9UQ16 869 aa12.37□□□□□ -0.43
VAMP7-206ENST00000488344 TMEM189-UBE2V1I3L0A0 370 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 K7ERI5 159 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 PTGESO14684 152 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 KIF4AO95239 1232 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 POU2F2P09086 479 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 SRFP11831 508 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.43
VAMP7-206ENST00000488344 PRPHP41219 470 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 DMP1Q13316 513 aaPredicted RBP12.36□□□□□ -0.43
VAMP7-206ENST00000488344 RTP2Q5QGT7 225 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 SIX5Q8N196 739 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 KCTD17Q8N5Z5 321 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 B3GALT6Q96L58 329 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 TIPINQ9BVW5 301 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
VAMP7-206ENST00000488344 SMOC2Q9H3U7 446 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 C17orf75Q9HAS0 396 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 SLC38A7Q9NVC3 462 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 FAM86C1Q9NVL1 165 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 KCNG1Q9UIX4 513 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 KIAA1024Q9UPX6 916 aa12.36□□□□□ -0.43
VAMP7-206ENST00000488344 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
VAMP7-206ENST00000488344 STK25O00506 426 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 SPATA31D3P0C874 917 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 LAMP2P13473 410 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 FSHRP23945 695 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 NBL1P41271 181 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 UVSSAQ2YD98 709 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 CWF19L1Q69YN2 538 aaKnown RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 DCLRE1AQ6PJP8 1040 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 PRSS55Q6UWB4 352 aaPredicted RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 SPATA31D4Q6ZUB0 917 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 GET4Q7L5D6 327 aaPredicted RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 CCDC105Q8IYK2 499 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 IGSF22Q8N9C0 903 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 MYADMQ96S97 322 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 TMEM134Q9H6X4 195 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
VAMP7-206ENST00000488344 TNFSF13BQ9Y275 285 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 GDAQ9Y2T3 454 aa12.35□□□□□ -0.43
VAMP7-206ENST00000488344 KMT2EQ8IZD2 1858 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 CCDC169A6NNP5 214 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 B3GAT3O94766 335 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 C8AP07357 584 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
VAMP7-206ENST00000488344 GRM5P41594 1212 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
VAMP7-206ENST00000488344 PTGDRQ13258 359 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 RAB33AQ14088 237 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 NAB2Q15742 525 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 ZNF568Q3ZCX4 644 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 EEF1DP3Q658K8 133 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 ANKS3Q6ZW76 656 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 MTSS1LQ765P7 747 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 SLC44A3Q8N4M1 653 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 LNX1Q8TBB1 728 aaPredicted RBP12.34□□□□□ -0.43
VAMP7-206ENST00000488344 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 SHDQ96IW2 340 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 PAAF1Q9BRP4 392 aa12.34□□□□□ -0.43
VAMP7-206ENST00000488344 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
VAMP7-206ENST00000488344 ANHXE9PGG2 379 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 CFHP08603 1231 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 MYBP10242 640 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 FGFR3P22607 806 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 PEX3P56589 373 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 STRN3Q13033 797 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 RILPL1Q5EBL4 403 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 FEZF2Q8TBJ5 459 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 PPP1R10Q96QC0 940 aaKnown RBP12.33□□□□□ -0.44
VAMP7-206ENST00000488344 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 KIFC3Q9BVG8 833 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 SLC2A4RGQ9NR83 387 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 MTRRQ9UBK8 725 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 CDH7Q9ULB5 785 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
VAMP7-206ENST00000488344 DENND4AQ7Z401 1863 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms