RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 GZMKP49863 264 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 ZNF143P52747 638 aaPredicted RBP0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 CHN2P52757 468 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 SF3B3Q15393 1217 aaKnown RBP0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 CYP2A13Q16696 494 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 FIGNQ5HY92 759 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 PRAMEF17Q5VTA0 474 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 VHLLQ6RSH7 139 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 RSPO2Q6UXX9 243 aaPredicted RBP0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 CATSPERGQ6ZRH7 1159 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 ZNF227Q86WZ6 799 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 RHOT2Q8IXI1 618 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 SPAG16Q8N0X2 631 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 B4GALNT2Q8NHY0 566 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 FBXL20Q96IG2 436 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 ZNF479Q96JC4 524 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 PHACTR3Q96KR7 559 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 PDGFCQ9NRA1 345 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 PLSCR4Q9NRQ2 329 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 INTS7Q9NVH2 962 aaKnown RBP0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 SELENONQ9NZV5 590 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 ADAMTS5Q9UNA0 930 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 MTO1Q9Y2Z2 717 aaKnown RBP0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 ASB1Q9Y576 335 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 A0A1B0GTW7 788 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 RASSF10A6NK89 507 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 TBKBP1A7MCY6 615 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 B4DGG1 531 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 ADM5C9JUS6 153 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 GCOM1H8Y6P7 765 aaPredicted RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 SMIM22K7EJ46 135 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 MYO1FO00160 1098 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 SCAMP3O14828 347 aaKnown RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 DNAJB5O75953 348 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 CLEC2LP0C7M8 214 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 VAV2P52735 878 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 RRP1P56182 461 aaKnown RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 ALDH6A1Q02252 535 aaKnown RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 NBPF8Q3BBV2 869 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 DAB2IPQ5VWQ8 1189 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 VWA1Q6PCB0 445 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 KCNT2Q6UVM3 1135 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 SUSD1Q6UWL2 747 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 USP53Q70EK8 1073 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 PIM3Q86V86 326 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 C19orf47Q8N9M1 422 aaKnown RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF485Q8NCK3 441 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 TFAP2CQ92754 450 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 ERCC4Q92889 916 aaPredicted RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF524Q96C55 264 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZC3H10Q96K80 434 aaKnown RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 C5orf34Q96MH7 638 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 UIMC1Q96RL1 719 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 TMEM204Q9BSN7 226 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 FAM234AQ9H0X4 552 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 POLR3BQ9NW08 1133 aaPredicted RBP0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 KCMF1Q9P0J7 381 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 LRP2BPQ9P2M1 347 aa0.58□□□□□ -2.32
RNU6-340P-201ENST00000364005 TRIP12Q14669 1992 aaPredicted RBP0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 CCDC78A2IDD5 438 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 ADAMTS3O15072 1205 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 FOXP2O15409 715 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 ALDH1A2O94788 518 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 RASGRP1O95267 797 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF16P17020 682 aaPredicted RBP0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 FGFR4P22455 802 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 RGS3P49796 1198 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 GAS1P54826 345 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 XPCQ01831 940 aaPredicted RBP0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 MAP4K2Q12851 820 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 PPP2R5EQ16537 467 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZIK1Q3SY52 487 aaPredicted RBP0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 SV2CQ496J9 727 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 TM4SF20Q53R12 229 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 MIS18BP1Q6P0N0 1132 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 PP632Q6XCG6 107 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 TMC4Q7Z404 712 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 COLGALT2Q8IYK4 626 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 NUDCD2Q8WVJ2 157 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 KCTD13Q8WZ19 329 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF428Q96B54 188 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 CRBNQ96SW2 442 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 TRIM55Q9BYV6 548 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 CATSPERZQ9NTU4 200 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 SH3BP4Q9P0V3 963 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 CRCT1Q9UGL9 99 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 USTQ9Y2C2 406 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 WDR17Q8IZU2 1322 aa0.57□□□□□ -2.32
RNU6-340P-201ENST00000364005 TRGV11A0A075B6L2 103 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 A0A1B0GU03 582 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 FAM83GA6ND36 823 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 B5MCH6 92 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 DDNO94850 711 aaPredicted RBP0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 GPANK1O95872 356 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 GAAP10253 952 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 GM2AP17900 193 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 DRD4P21917 467 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 GRIA2P42262 883 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 GPR85P60893 370 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 HSD11B2P80365 405 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms