RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 GRIN1Q05586 938 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 IZUMO3Q5VZ72 239 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 SCG3Q8WXD2 468 aaKnown RBP13.58□□□□□ -0.23
PTCH1-212ENST00000546744 CCDC28BQ9BUN5 200 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 HACD3Q9P035 362 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 OCRLQ01968 901 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 RASGRF1Q13972 1273 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 CROCCP3Q8IVE0 287 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-212ENST00000546744 MAGEC3Q8TD91 643 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 TGFBRAP1Q8WUH2 860 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 SLC4A7Q9Y6M7 1214 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 HNRNPDLO14979 420 aaKnown RBP13.58□□□□□ -0.24
PTCH1-212ENST00000546744 COBLO75128 1261 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 NR3C1P04150 777 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 FAM102BQ5T8I3 360 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 TMEM35BQ8NCS4 154 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 RAPGEF5Q92565 580 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 RAD54LQ92698 747 aa13.58□□□□□ -0.24
PTCH1-212ENST00000546744 RAD51CO43502 376 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 S100BP04271 92 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 KRT19P08727 400 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 CCDC159P0C7I6 412 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 SERPINB1P30740 379 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 PSMC1P62191 440 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 PPP2R5CQ13362 524 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 KNOP1Q1ED39 458 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 TRMT5Q32P41 509 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 EDRF1Q3B7T1 1238 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 MAPKAPK5Q8IW41 473 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 HIPK4Q8NE63 616 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ZNF229Q9UJW7 825 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 L3MBTL1Q9Y468 752 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ADGRA3Q8IWK6 1321 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 A8MXQ7 604 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 DNAJC6O75061 913 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 PHKA1P46020 1223 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 SFSWAPQ12872 951 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 R3HDM1Q15032 1099 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 TRIP10Q15642 601 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 MAGEB18Q96M61 343 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 UIMC1Q96RL1 719 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ANKZF1Q9H8Y5 726 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 WDR64B1ANS9 1081 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 PRPSAP2O60256 369 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 SOX5P35711 763 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 HACE1Q8IYU2 909 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 IP6K2Q9UHH9 426 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 CNOT7Q9UIV1 285 aaKnown RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ZNF233A6NK53 670 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 PDIA5Q14554 519 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 NCAPHQ15003 741 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 MAEAQ7L5Y9 396 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 JAMLQ86YT9 394 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 RBBP8NLQ8NC74 664 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-212ENST00000546744 CASP10Q92851 521 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 C7orf25Q9BPX7 421 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 ADAM22Q9P0K1 906 aa13.57□□□□□ -0.24
PTCH1-212ENST00000546744 NFAT5O94916 1531 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 hCG_2014768A0A024R1R8 64 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 PDXKO00764 312 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 LDHAP00338 332 aaKnown RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 TMEM253P0C7T8 217 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 HSPA1AP0DMV8 641 aaKnown RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 HSPA1BP0DMV9 641 aaKnown RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 TRIP13Q15645 432 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 HIF1AQ16665 826 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 CENPTQ96BT3 561 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 ZFRQ96KR1 1074 aaKnown RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 TMOD1P28289 359 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 NPEPPSP55786 919 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 KRT17Q04695 432 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 BBS5Q8N3I7 341 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 CCT7Q99832 543 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 LY9Q9HBG7 655 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 DDX28Q9NUL7 540 aaKnown RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 ZNF185O15231 689 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 SERPINI2O75830 405 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 RARGP13631 454 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 CDH2P19022 906 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 IFRD2Q12894 506 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms