RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 DYMQ7RTS9 669 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 RTN4RL1Q86UN2 441 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-201ENST00000261813 STAMQ92783 540 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 DRC1Q96MC2 740 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 KIFC3Q9BVG8 833 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 COL25A1Q9BXS0 654 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-201ENST00000261813 GTPBP4Q9BZE4 634 aaKnown RBP12.76□□□□□ -0.37
PFDN1-201ENST00000261813 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-201ENST00000261813 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 SERTAD1Q9UHV2 236 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
PFDN1-201ENST00000261813 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
PFDN1-201ENST00000261813 SMC2O95347 1197 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 KRT18P05783 430 aaKnown RBP12.75□□□□□ -0.37
PFDN1-201ENST00000261813 SFPQP23246 707 aaKnown RBP eCLIP12.75□□□□□ -0.37
PFDN1-201ENST00000261813 DNAJB2P25686 324 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 NPTX2P47972 431 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 ZNF131P52739 623 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 PEX3P56589 373 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 DEFB103AP81534 67 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 DSC3Q14574 896 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 PPP2R5AQ15172 486 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 AMHR2Q16671 573 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 ZSCAN23Q3MJ62 389 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 LONRF3Q496Y0 759 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 ODR4Q5SWX8 454 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 DNAJC19Q96DA6 116 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 IFT74Q96LB3 600 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 MTIF3Q9H2K0 278 aaKnown RBP12.75□□□□□ -0.37
PFDN1-201ENST00000261813 C17orf75Q9HAS0 396 aa12.75□□□□□ -0.37
PFDN1-201ENST00000261813 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 ENPP3O14638 875 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 EFCAB14O75071 495 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 EDN1P05305 212 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 PLS3P13797 630 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 ZNF445P59923 1031 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 DMP1Q13316 513 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-201ENST00000261813 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
PFDN1-201ENST00000261813 CATSPER4Q7RTX7 472 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 TMCO2Q7Z6W1 182 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-201ENST00000261813 METTL3Q86U44 580 aaKnown RBP12.74□□□□□ -0.37
PFDN1-201ENST00000261813 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 DEPTORQ8TB45 409 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 CCDC47Q96A33 483 aaKnown RBP12.74□□□□□ -0.37
PFDN1-201ENST00000261813 FAM161BQ96MY7 647 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 FTHL17Q9BXU8 183 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 CCDC113Q9H0I3 377 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 MICAL3Q7RTP6 2002 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 PTPRSQ13332 1948 aa12.74□□□□□ -0.37
PFDN1-201ENST00000261813 FRMD3A2A2Y4 597 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 CCDC169A6NNP5 214 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 TSPAN1O60635 241 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
PFDN1-201ENST00000261813 FAM13AO94988 1023 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 CAVIN2O95810 425 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 CASP1P29466 404 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 KCNJ6P48051 423 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 POSTNQ15063 836 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 CAMK4Q16566 473 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 SWT1Q5T5J6 900 aaKnown RBP12.73□□□□□ -0.37
PFDN1-201ENST00000261813 GRAMD1CQ8IYS0 662 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 PAGE5Q96GU1 130 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 GUCD1Q96NT3 240 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 FIZ1Q96SL8 496 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 ADAM2Q99965 735 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
PFDN1-201ENST00000261813 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
PFDN1-201ENST00000261813 FZD8Q9H461 694 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 PARVGQ9HBI0 331 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 RGS18Q9NS28 235 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
PFDN1-201ENST00000261813 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
PFDN1-201ENST00000261813 DENND3A2RUS2 1198 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 C9IYK1 514 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 SLC16A4O15374 487 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 B4GALT5O43286 388 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 AMHP03971 560 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 PRKCBP05771 671 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 HOXA11P31270 313 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-201ENST00000261813 AFMP43652 599 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 NCKAP1LP55160 1127 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 FAM187BQ17R55 369 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 CNNM4Q6P4Q7 775 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 TAS1R3Q7RTX0 852 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms