RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 LINC01599Q8WXQ3 324 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 HERVK_113Q902F9 699 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 PRIMPOLQ96LW4 560 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 FGFBP2Q9BYJ0 223 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.52
RNF40-207ENST00000565931 CHST12Q9NRB3 414 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 PCDHA5Q9Y5H7 936 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 LTBP2Q14767 1821 aa18.33■□□□□ 0.52
RNF40-207ENST00000565931 TTLL13PA6NNM8 815 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 ENPP3O14638 875 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 BAIAP3O94812 1187 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 MBD3O95983 291 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 ARF4P18085 180 aaPredicted RBP18.32■□□□□ 0.52
RNF40-207ENST00000565931 AXLP30530 894 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 CASP5P51878 434 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 KCNB1Q14721 858 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
RNF40-207ENST00000565931 C9orf50Q5SZB4 431 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 NT5DC1Q5TFE4 455 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 SPATA20Q8TB22 786 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 ERCC4Q92889 916 aaPredicted RBP18.32■□□□□ 0.52
RNF40-207ENST00000565931 CLSTN2Q9H4D0 955 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
RNF40-207ENST00000565931 USP20Q9Y2K6 914 aa18.32■□□□□ 0.52
RNF40-207ENST00000565931 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 CNTNAP2Q9UHC6 1331 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 EFCAB14O75071 495 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 RHOBTB3O94955 611 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 SMC2O95347 1197 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 GCNT3O95395 438 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 MYBP10242 640 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 ZSCAN20P17040 1043 aaPredicted RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 ABCD1P33897 745 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 STRN3Q13033 797 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 PSMD2Q13200 908 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 PRPF4BQ13523 1007 aaKnown RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 SHHQ15465 462 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 GLIS3Q8NEA6 775 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 CCDC47Q96A33 483 aaKnown RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 CPB2Q96IY4 423 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 ADAM2Q99965 735 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 TSPYL2Q9H2G4 693 aaPredicted RBP18.31■□□□□ 0.52
RNF40-207ENST00000565931 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 RGS18Q9NS28 235 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 TBX20Q9UMR3 447 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
RNF40-207ENST00000565931 A0A1B0GUA9 196 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 STK4Q13043 487 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 ALCAMQ13740 583 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 CAMK4Q16566 473 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 RASIP1Q5U651 963 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.3■□□□□ 0.52
RNF40-207ENST00000565931 EPM2AIP1Q7L775 607 aaPredicted RBP18.3■□□□□ 0.52
RNF40-207ENST00000565931 MAP4K3Q8IVH8 894 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 SMARCE1Q969G3 411 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 HVCN1Q96D96 273 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 CCDC51Q96ER9 411 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 GSDMAQ96QA5 445 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 ACO2Q99798 780 aaKnown RBP18.3■□□□□ 0.52
RNF40-207ENST00000565931 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
RNF40-207ENST00000565931 MRPL4Q9BYD3 311 aaKnown RBP18.3■□□□□ 0.52
RNF40-207ENST00000565931 SLC39A2Q9NP94 309 aa18.3■□□□□ 0.52
RNF40-207ENST00000565931 CXXC1Q9P0U4 656 aaPredicted RBP18.3■□□□□ 0.52
RNF40-207ENST00000565931 C9IYK1 514 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 PRPF6O94906 941 aaKnown RBP18.29■□□□□ 0.52
RNF40-207ENST00000565931 PIGRP01833 764 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 WDR5P61964 334 aaKnown RBP18.29■□□□□ 0.52
RNF40-207ENST00000565931 FAM189BP81408 668 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 KCNA1Q09470 495 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 UBXN11Q5T124 520 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 L1TD1Q5T7N2 865 aaKnown RBP18.29■□□□□ 0.52
RNF40-207ENST00000565931 NOTUMQ6P988 496 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 ZPBP2Q6X784 338 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 CDR2LQ86X02 465 aaPredicted RBP18.29■□□□□ 0.52
RNF40-207ENST00000565931 KIAA0895Q8NCT3 520 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 TRAIPQ9BWF2 469 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 PDZD7Q9H5P4 517 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 RMND1Q9NWS8 449 aa18.29■□□□□ 0.52
RNF40-207ENST00000565931 SIP14410 1827 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 TNRC18O15417 2968 aaPredicted RBP18.28■□□□□ 0.52
RNF40-207ENST00000565931 ZBBXA8MT70 800 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 N4BP3O15049 544 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 PTMSP20962 102 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 TMEM132AQ24JP5 1023 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 ATF7IP2Q5U623 682 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 EEF1DP3Q658K8 133 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 TWF2Q6IBS0 349 aaKnown RBP18.28■□□□□ 0.52
RNF40-207ENST00000565931 STXBP4Q6ZWJ1 553 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 SLC24A5Q71RS6 500 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 SCFD1Q8WVM8 642 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 ACCSQ96QU6 501 aa18.28■□□□□ 0.52
RNF40-207ENST00000565931 MTIF3Q9H2K0 278 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms