RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DYTNA2CJ06 578 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 GRK2P25098 689 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 S100GP29377 79 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 EXD1Q8NHP7 514 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 FAM149B1Q96BN6 582 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ZHX2Q9Y6X8 837 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 BTBD18B2RXH4 712 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 S100A1P23297 94 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 TFCP2Q12800 502 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 FBXO42Q6P3S6 717 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 FAR2Q96K12 515 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ELAC2Q9BQ52 826 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 SBNO2Q9Y2G9 1366 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 F8W031 263 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ESRP1Q6NXG1 681 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF483Q8TF39 744 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 KRT35Q92764 455 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 SRPK1Q96SB4 655 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 MAPKAPK2P49137 400 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 TRPM8Q7Z2W7 1104 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 RASSF5Q8WWW0 418 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 LPIN2Q92539 896 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 KLHL8Q9P2G9 620 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 PHF8Q9UPP1 1060 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 NDUFA10O95299 355 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 EVPLLA8MZ36 301 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 SF3A3Q12874 501 aaKnown RBP eCLIP9.33□□□□□ -0.926e-9■■■■■ 59.3
SYNE3-205ENST00000557275 STAT4Q14765 748 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 TTC33Q6PID6 262 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 WWP2O00308 870 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 PSMD3O43242 534 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 WARSP23381 471 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 CYP2C19P33261 490 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 MAD2L2Q9UI95 211 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ATPIF1Q9UII2 106 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 IYDQ6PHW0 289 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 FAM180AQ6UWF9 173 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 LRRC8DQ7L1W4 858 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ATP6V1G3Q96LB4 118 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 FRMD8Q9BZ67 464 aaPredicted RBP9.33□□□□□ -0.92
SYNE3-205ENST00000557275 CFAP43Q8NDM7 1665 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 RIPPLY1Q0D2K3 151 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 ASPRV1Q53RT3 343 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 RHPN2Q8IUC4 686 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 EGFL8Q99944 293 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 STOML2Q9UJZ1 356 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 PARD3Q8TEW0 1356 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 MED26O95402 600 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 SERHL2Q9H4I8 314 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 SERHLQ9NQF3 203 aa9.33□□□□□ -0.92
SYNE3-205ENST00000557275 KYAT1Q16773 422 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 WNT8AQ9H1J5 351 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 TAF1DQ9H5J8 278 aaPredicted RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 BFARQ9NZS9 450 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ZBTB1Q9Y2K1 713 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 YY1P25490 414 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 PSMA2P25787 234 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CLCN6P51797 869 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ASAP3Q8TDY4 903 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 POP5Q969H6 163 aaKnown RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 MNTQ99583 582 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 SPATA16Q9BXB7 569 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 AKAP10O43572 662 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 PEX1O43933 1283 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 HIBADHP31937 336 aaKnown RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 STX5Q13190 355 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ORC2Q13416 577 aaPredicted RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 TRIQKQ629K1 86 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 HEATR6Q6AI08 1181 aaKnown RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 COPS6Q7L5N1 327 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 EPN3Q9H201 632 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 FOXO3O43524 673 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CHST3Q7LGC8 479 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ARHGEF12Q9NZN5 1544 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 A8MXQ7 604 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ELF1P32519 619 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 NPEPPSP55786 919 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 UBE3AQ05086 875 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 GCC2Q8IWJ2 1684 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 SPANXN2Q5MJ10 180 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 GALNT8Q9NY28 637 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 MFN2O95140 757 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC130P13994 396 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ALDH1B1P30837 517 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 SERPINB8P50452 374 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 C2CD6Q53TS8 623 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 KRT27Q7Z3Y8 459 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms