RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 ZEB2O60315 1214 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 C8BP07358 591 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 DPEP1P16444 411 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 KCNA3P22001 575 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 THBS2P35442 1172 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 EPHB3P54753 998 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 TEFQ10587 303 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 ZNF174Q15697 407 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 CR1LQ2VPA4 569 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 CATSPEREQ5SY80 951 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 TEPPQ6URK8 271 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 STAG1Q8WVM7 1258 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 TOE1Q96GM8 510 aaKnown RBP10.46□□□□□ -0.73
MRPS35-204ENST00000542199 MS4A5Q9H3V2 200 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 SIRT5Q9NXA8 310 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 NARFQ9UHQ1 456 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 SPO11Q9Y5K1 396 aa10.46□□□□□ -0.73
MRPS35-204ENST00000542199 COL15A1P39059 1388 aa10.46□□□□□ -0.74
MRPS35-204ENST00000542199 KIAA1551Q9HCM1 1747 aa10.46□□□□□ -0.74
MRPS35-204ENST00000542199 UBR2Q8IWV8 1755 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 HEG1Q9ULI3 1381 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 PEX10O60683 326 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 STARD3NLO95772 234 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 MMEP08473 750 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 U2AF1L5P0DN76 240 aaPredicted RBP10.45□□□□□ -0.74
MRPS35-204ENST00000542199 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
MRPS35-204ENST00000542199 U2AF1Q01081 240 aaKnown RBP eCLIP10.45□□□□□ -0.74
MRPS35-204ENST00000542199 ESRP1Q6NXG1 681 aaKnown RBP10.45□□□□□ -0.74
MRPS35-204ENST00000542199 LDHDQ86WU2 507 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 PCDHA5Q9Y5H7 936 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 PCNTO95613 3336 aa10.45□□□□□ -0.74
MRPS35-204ENST00000542199 IRS2Q9Y4H2 1338 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 ATF2P15336 505 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 OCRLQ01968 901 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 NFIXQ14938 502 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 CC2D1AQ6P1N0 951 aaPredicted RBP10.44□□□□□ -0.74
MRPS35-204ENST00000542199 PROSER1Q86XN7 944 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 TEX13AQ9BXU3 409 aaPredicted RBP10.44□□□□□ -0.74
MRPS35-204ENST00000542199 FAM53CQ9NYF3 392 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 WASF3Q9UPY6 502 aa10.44□□□□□ -0.74
MRPS35-204ENST00000542199 MCTP1Q6DN14 999 aa10.43□□□□□ -0.74
MRPS35-204ENST00000542199 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
MRPS35-204ENST00000542199 C11orf74Q86VG3 221 aa10.43□□□□□ -0.74
MRPS35-204ENST00000542199 SPATS2Q86XZ4 545 aaKnown RBP10.43□□□□□ -0.74
MRPS35-204ENST00000542199 FMNL2Q96PY5 1086 aa10.43□□□□□ -0.74
MRPS35-204ENST00000542199 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
MRPS35-204ENST00000542199 GCM1Q9NP62 436 aa10.43□□□□□ -0.74
MRPS35-204ENST00000542199 TEX51A0A1B0GUA7 166 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 LCHNA4D1U4 455 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 BTBD11A6QL63 1104 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 FOXP2O15409 715 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 KCNQ3O43525 872 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 SDHAP31040 664 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 SMAD3P84022 425 aaKnown RBP10.42□□□□□ -0.74
MRPS35-204ENST00000542199 CACNB2Q08289 660 aaPredicted RBP10.42□□□□□ -0.74
MRPS35-204ENST00000542199 SMAD2Q15796 467 aaKnown RBP10.42□□□□□ -0.74
MRPS35-204ENST00000542199 RNF219Q5W0B1 726 aaPredicted RBP10.42□□□□□ -0.74
MRPS35-204ENST00000542199 CD276Q5ZPR3 534 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 IGDCC3Q8IVU1 814 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 ASB15Q8WXK1 588 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 TRIM8Q9BZR9 551 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 VTA1Q9NP79 307 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 ACSS2Q9NR19 701 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
MRPS35-204ENST00000542199 DDX56Q9NY93 547 aaKnown RBP10.42□□□□□ -0.74
MRPS35-204ENST00000542199 HTATSF1O43719 755 aaKnown RBP10.41□□□□□ -0.74
MRPS35-204ENST00000542199 KATNA1O75449 491 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 TMEM253P0C7T8 217 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 NCAM1P13591 858 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 IL6STP40189 918 aaPredicted RBP10.41□□□□□ -0.74
MRPS35-204ENST00000542199 GUCY2FP51841 1108 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 BROXQ5VW32 411 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 LIPIQ6XZB0 460 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 MCM10Q7L590 875 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 MZB1Q8WU39 189 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 CPA5Q8WXQ8 436 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
MRPS35-204ENST00000542199 SLC5A5Q92911 643 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 SLC5A4Q9NY91 659 aa10.41□□□□□ -0.74
MRPS35-204ENST00000542199 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
MRPS35-204ENST00000542199 SIPA1L3O60292 1781 aaPredicted RBP10.41□□□□□ -0.74
MRPS35-204ENST00000542199 N4BP2Q86UW6 1770 aaPredicted RBP10.41□□□□□ -0.74
MRPS35-204ENST00000542199 PRKD3O94806 890 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 SERPINB2P05120 415 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 AOAHP28039 575 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 CHRNA5P30532 468 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 MC4RP32245 332 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 DBPQ10586 325 aaPredicted RBP10.4□□□□□ -0.74
MRPS35-204ENST00000542199 TMC5Q6UXY8 1006 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 FBXO15Q8NCQ5 510 aaPredicted RBP10.4□□□□□ -0.74
MRPS35-204ENST00000542199 SMARCC2Q8TAQ2 1214 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 RTF1Q92541 710 aaKnown RBP10.4□□□□□ -0.74
MRPS35-204ENST00000542199 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 RNF38Q9H0F5 515 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 SLC39A2Q9NP94 309 aa10.4□□□□□ -0.74
MRPS35-204ENST00000542199 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms