RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 ACKR2O00590 384 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 PSMA7O14818 248 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 ERLIN2O94905 339 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 CHRNA1P02708 482 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 CCDC192P0DO97 292 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 PYGBP11216 843 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 NLRP12P59046 1061 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
RFC1-210ENST00000505077 TMEM62Q0P6H9 643 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 STK4Q13043 487 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
RFC1-210ENST00000505077 L1TD1Q5T7N2 865 aaKnown RBP11.28□□□□□ -0.6
RFC1-210ENST00000505077 ZNF618Q5T7W0 954 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 ZPBP2Q6X784 338 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 TSHZ1Q6ZSZ6 1077 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 APBB1IPQ7Z5R6 666 aaPredicted RBP11.28□□□□□ -0.6
RFC1-210ENST00000505077 CCDC51Q96ER9 411 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 ACCSQ96QU6 501 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 OSMRQ99650 979 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 FDXACB1Q9BRP7 624 aaPredicted RBP11.28□□□□□ -0.6
RFC1-210ENST00000505077 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
RFC1-210ENST00000505077 FZD8Q9H461 694 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 TBX20Q9UMR3 447 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.6
RFC1-210ENST00000505077 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.61
RFC1-210ENST00000505077 INO80B-WBP1J3KQ70 363 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 HNRNPDLO14979 420 aaKnown RBP11.27□□□□□ -0.61
RFC1-210ENST00000505077 GPR182O15218 404 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 RPS6KA5O75582 802 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 PIGRP01833 764 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 PRKCBP05771 671 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 PFKMP08237 780 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 CTSHP09668 335 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 NMT1P30419 496 aaKnown RBP11.27□□□□□ -0.61
RFC1-210ENST00000505077 AXLP30530 894 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 FBXO47Q5MNV8 452 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 TRAF7Q6Q0C0 670 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 HS2ST1Q7LGA3 356 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 TMEM174Q8WUU8 243 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 SCFD1Q8WVM8 642 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 APBB2Q92870 758 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.61
RFC1-210ENST00000505077 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.61
RFC1-210ENST00000505077 KIFC3Q9BVG8 833 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 NAT10Q9H0A0 1025 aaKnown RBP11.27□□□□□ -0.61
RFC1-210ENST00000505077 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 CHST12Q9NRB3 414 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 TBC1D7Q9P0N9 293 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 GINS2Q9Y248 185 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 ZMYM2Q9UBW7 1377 aa11.27□□□□□ -0.61
RFC1-210ENST00000505077 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 SYCE3A1L190 88 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 BIN1O00499 593 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 PDXKO00764 312 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 EVI5O60447 810 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 TIMP1P01033 207 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 IQCF3P0C7M6 154 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 MYBP10242 640 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 RAG1P15918 1043 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 BMP6P22004 513 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 CASP5P51878 434 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 LRRC63Q05C16 580 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 TYRO3Q06418 890 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 PAK2Q13177 524 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 PRPF4BQ13523 1007 aaKnown RBP11.26□□□□□ -0.61
RFC1-210ENST00000505077 LPIN1Q14693 890 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
RFC1-210ENST00000505077 CATSPER4Q7RTX7 472 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 SYCP3Q8IZU3 236 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 ADSSL1Q8N142 457 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 FTHL17Q9BXU8 183 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 AGPAT5Q9NUQ2 364 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 TYW1Q9NV66 732 aaKnown RBP11.26□□□□□ -0.61
RFC1-210ENST00000505077 GDAQ9Y2T3 454 aa11.26□□□□□ -0.61
RFC1-210ENST00000505077 GBF1Q92538 1859 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 N4BP3O15049 544 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 KIAA0391O15091 583 aaKnown RBP11.25□□□□□ -0.61
RFC1-210ENST00000505077 TSPAN1O60635 241 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 TOM1L1O75674 476 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 CXCL10P02778 98 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 ERCC5P28715 1186 aaPredicted RBP11.25□□□□□ -0.61
RFC1-210ENST00000505077 PRCPP42785 496 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 LIG4P49917 911 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 ZNF445P59923 1031 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 AMHR2Q16671 573 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 DCAF4L1Q3SXM0 396 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 ZC2HC1CQ53FD0 456 aaPredicted RBP11.25□□□□□ -0.61
RFC1-210ENST00000505077 SLFN12LQ6IEE8 588 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 NOTUMQ6P988 496 aa11.25□□□□□ -0.61
RFC1-210ENST00000505077 TAS1R3Q7RTX0 852 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms