RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 ZC2HC1CQ53FD0 456 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 NT5DC1Q5TFE4 455 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 RTN4RL1Q86UN2 441 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 PRIMPOLQ96LW4 560 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 HOOK1Q9UJC3 728 aaKnown RBP11.62□□□□□ -0.55
SMC1A-206ENST00000470241 PCDHA5Q9Y5H7 936 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 SIP14410 1827 aa11.62□□□□□ -0.55
SMC1A-206ENST00000470241 CNTNAP2Q9UHC6 1331 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.61□□□□□ -0.55
SMC1A-206ENST00000470241 ERLIN2O94905 339 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 SMC2O95347 1197 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 GCNT3O95395 438 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 FGBP02675 491 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 ARF4P18085 180 aaPredicted RBP11.61□□□□□ -0.55
SMC1A-206ENST00000470241 SCP2P22307 547 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 KCNA1Q09470 495 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 STK4Q13043 487 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 PRPF4BQ13523 1007 aaKnown RBP11.61□□□□□ -0.55
SMC1A-206ENST00000470241 KCNB1Q14721 858 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 C9orf50Q5SZB4 431 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 EPM2AIP1Q7L775 607 aaPredicted RBP11.61□□□□□ -0.55
SMC1A-206ENST00000470241 OTOP2Q7RTS6 562 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 MAP4K3Q8IVH8 894 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 KIAA0895Q8NCT3 520 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 HERVK_113Q902F9 699 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 FTHL17Q9BXU8 183 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
SMC1A-206ENST00000470241 SLC39A2Q9NP94 309 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 CHST12Q9NRB3 414 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 EXOC1Q9NV70 894 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 TBX20Q9UMR3 447 aa11.61□□□□□ -0.55
SMC1A-206ENST00000470241 PIN4Q9Y237 131 aaKnown RBP11.61□□□□□ -0.55
SMC1A-206ENST00000470241 A0A1B0GUA9 196 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ABHD14A-ACY1A0A1B0GW23 586 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ENPP3O14638 875 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 BAIAP3O94812 1187 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 PRPF6O94906 941 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ACTN1P12814 892 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 AXLP30530 894 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 STRN3Q13033 797 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 PSMD2Q13200 908 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ALCAMQ13740 583 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 IKBKEQ14164 716 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 UBXN11Q5T124 520 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 L1TD1Q5T7N2 865 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 RASIP1Q5U651 963 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.555e-7■□□□□ 9.5
SMC1A-206ENST00000470241 FAM43BQ6ZT52 329 aaPredicted RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 CDR2LQ86X02 465 aaPredicted RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ZNF507Q8TCN5 953 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 SCFD1Q8WVM8 642 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 CCDC47Q96A33 483 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 HVCN1Q96D96 273 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 GSDMAQ96QA5 445 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ACO2Q99798 780 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 ADAM2Q99965 735 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 TARS2Q9BW92 718 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 MRPL4Q9BYD3 311 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 UBE2OQ9C0C9 1292 aaKnown RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 IKZF4Q9H2S9 585 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 PRO3102Q9H379 93 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 PTPRHQ9HD43 1115 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 RGS18Q9NS28 235 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
SMC1A-206ENST00000470241 MAN1B1Q9UKM7 699 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
SMC1A-206ENST00000470241 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 C9IYK1 514 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ABLIM1O14639 778 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 PIGRP01833 764 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-206ENST00000470241 PTMSP20962 102 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 PROZP22891 400 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ABCD1P33897 745 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 BMP8BP34820 402 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 HOXD13P35453 343 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 WDR5P61964 334 aaKnown RBP11.59□□□□□ -0.55
SMC1A-206ENST00000470241 FAM189BP81408 668 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 NCBP1Q09161 790 aaKnown RBP11.59□□□□□ -0.55
SMC1A-206ENST00000470241 SHHQ15465 462 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 NFKBIBQ15653 356 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 BMT2Q1RMZ1 405 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ATF7IP2Q5U623 682 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 EEF1DP3Q658K8 133 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 TWF2Q6IBS0 349 aaKnown RBP11.59□□□□□ -0.55
SMC1A-206ENST00000470241 SLC39A4Q6P5W5 647 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 NOTUMQ6P988 496 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ZPBP2Q6X784 338 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 CCDC51Q96ER9 411 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ACCSQ96QU6 501 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 EIF2AQ9BY44 585 aaKnown RBP11.59□□□□□ -0.55
SMC1A-206ENST00000470241 PDZD7Q9H5P4 517 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms