RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MAP7D2Q96T17 732 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 SPATA6Q9NWH7 488 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 COL4A3Q01955 1670 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 FAM86B1E9PN63 330 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 INPPL1O15357 1258 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 MAGEB2O15479 319 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 OFD1O75665 1012 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 DDHD2O94830 711 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 ADRB1P08588 477 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 FAM86B2P0C5J1 330 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 LAMP2P13473 410 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 TGM1P22735 817 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 ZNF76P36508 570 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 GNAQP50148 359 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 AK2P54819 239 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 GPC5P78333 572 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 SNW1Q13573 536 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 GLB1LQ6UWU2 654 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 PLA2G4DQ86XP0 818 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 MB21D2Q8IYB1 491 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 CMASQ8NFW8 434 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 SMG7Q92540 1137 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 ZNF707Q96C28 371 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 ANO3Q9BYT9 981 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 PARD6AQ9NPB6 346 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 MRPL17Q9NRX2 175 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 GABBR1Q9UBS5 961 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 USP18Q9UMW8 372 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 NUMBLQ9Y6R0 609 aa15.55■□□□□ 0.08
SHKBP1-208ENST00000595726 ANKRD11Q6UB99 2663 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 LAMTOR5O43504 91 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 TMOD1P28289 359 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 STARD6P59095 220 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 DRP2Q13474 957 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 WWC2Q6AWC2 1192 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 TSSK4Q6SA08 328 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 NFXL1Q6ZNB6 911 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 ATRIPQ8WXE1 791 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 STAMQ92783 540 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 MAP4K1Q92918 833 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 NXPE3Q969Y0 559 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 ASPMQ8IZT6 3477 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 CEP295Q9C0D2 2601 aa15.54■□□□□ 0.08
SHKBP1-208ENST00000595726 PRR5-ARHGAP8B1AHC4 643 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 ANHXE9PGG2 379 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 IPO5O00410 1097 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 TEX28O15482 410 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 NEFLP07196 543 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 CD72P21854 359 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 ARHGAP8P85298 464 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 LMNB2Q03252 620 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 HTR4Q13639 388 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 ZNF528Q3MIS6 628 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 GET4Q7L5D6 327 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 GPR161Q8N6U8 529 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 ESYT1Q9BSJ8 1104 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 RTKNQ9BST9 563 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 RIC8AQ9NPQ8 531 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 SLC2A4RGQ9NR83 387 aa15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 SMG5Q9UPR3 1016 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-208ENST00000595726 SPEGQ15772 3267 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 IGLV3-22A0A075B6J6 115 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 SPTLC1O15269 473 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 PRC1O43663 620 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 ZNF862O60290 1169 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 SREBF1P36956 1147 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 NAPAP54920 295 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 UBXN2BQ14CS0 331 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 PALB2Q86YC2 1186 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 FGF14Q92915 247 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 RPS6KC1Q96S38 1066 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 BCO2Q9BYV7 579 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 LSG1Q9H089 658 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 PIDD1Q9HB75 910 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 CHST12Q9NRB3 414 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 FBXO4Q9UKT5 387 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 CEP131Q9UPN4 1083 aa15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 RBM8AQ9Y5S9 174 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-208ENST00000595726 DOCK8Q8NF50 2099 aa15.52■□□□□ 0.07
SHKBP1-208ENST00000595726 A0A087WZ62 844 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 KANSL1LA0AUZ9 987 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 FAM170BA6NMN3 283 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 NRP1O14786 923 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 FOSP01100 380 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 ALDH2P05091 517 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 PSAPP07602 524 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 PPM1JQ5JR12 505 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 PARM1Q6UWI2 310 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 TMTC3Q6ZXV5 915 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 NIPA1Q7RTP0 329 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 ZBTB44Q8NCP5 570 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 SHDQ96IW2 340 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 FDXACB1Q9BRP7 624 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 ZNF577Q9BSK1 485 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 FAM105AQ9NUU6 356 aa15.51■□□□□ 0.07
SHKBP1-208ENST00000595726 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.51■□□□□ 0.071e-8■■■■■ 45.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms