RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TTF2Q9UNY4 1162 aaKnown RBP0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF451Q9Y4E5 1061 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 BACE2Q9Y5Z0 518 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRBV23OR9-2A0A075B6M9 112 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 A0A1B0GU03 582 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 DRGXA6NNA5 263 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 LEFTY2O00292 366 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 STC2O76061 302 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 IPO13O94829 963 aaKnown RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 SEC24DO94855 1032 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF432O94892 652 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 BPNT1O95861 308 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 LTFP02788 710 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 PLS3P13797 630 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 DDX6P26196 483 aaKnown RBP eCLIP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 CDKN2AP42771 156 aaKnown RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 VEGFCP49767 419 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 STAT5BP51692 787 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 MRPS35P82673 323 aaKnown RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 HTRA4P83105 476 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF211Q13398 564 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 ASIC2Q16515 512 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 TMEM119Q4V9L6 283 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 CEP78Q5JTW2 689 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 AXDND1Q5T1B0 1012 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 PXDC1Q5TGL8 231 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 LARP1BQ659C4 914 aaKnown RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 DPP8Q6V1X1 898 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 AMIGO2Q86SJ2 522 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 CCDC144CPQ8IYA2 1237 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 RTKN2Q8IZC4 609 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 CTCFLQ8NI51 663 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 ACTRT2Q8TDY3 377 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 NKD2Q969F2 451 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 ALKBH8Q96BT7 664 aaKnown RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 SETDB2Q96T68 719 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 TCF25Q9BQ70 676 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 SMOC1Q9H4F8 434 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 SMURF1Q9HCE7 757 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 GPRC5CQ9NQ84 441 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 LRIT1Q9P2V4 623 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 MCM8Q9UJA3 840 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 MAP3K2Q9Y2U5 619 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 CTDP1Q9Y5B0 961 aaPredicted RBP0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 ENTPD2Q9Y5L3 495 aa0.2□□□□□ -2.38
RNU6-542P-201ENST00000516405 TENM3Q9P273 2699 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 AGRNO00468 2067 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 MARCH11A6NNE9 402 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 KCNU1A8MYU2 1149 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 ARNTLO00327 626 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 SLC27A2O14975 620 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 CBLP22681 906 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 BCL6P41182 706 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 COMPP49747 757 aaPredicted RBP0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 MAP3K12Q12852 859 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 TWIST1Q15672 202 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 INPP5JQ15735 1006 aaPredicted RBP0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 TDRD10Q5VZ19 366 aaKnown RBP0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 IQSEC1Q6DN90 963 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 MFSD5Q6N075 450 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 NLRC3Q7RTR2 1065 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 PPFIBP1Q86W92 1011 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 ANKRD53Q8N9V6 530 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 REPS2Q8NFH8 660 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 PHOSPHO1Q8TCT1 267 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 GATAD2BQ8WXI9 593 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZPBPQ9BS86 351 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 DCTN5Q9BTE1 182 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 NDC1Q9BTX1 674 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 PRSS22Q9GZN4 317 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 SLC6A15Q9H2J7 730 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 RNF181Q9P0P0 153 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 SUCOQ9UBS9 1254 aaKnown RBP0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 TELO2Q9Y4R8 837 aa0.19□□□□□ -2.38
RNU6-542P-201ENST00000516405 LY6G6EA0A0G2JKS1 128 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 ACOT7O00154 380 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 PPP6CO00743 305 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 NDUFB5O43674 189 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 RAD21O60216 631 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 USP17L7P0C7H9 530 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZSCAN20P17040 1043 aaPredicted RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 TNFRSF8P28908 595 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 CSRP3P50461 194 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZXDBP98169 803 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 ARHGAP4P98171 946 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 RESTQ13127 1097 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 CCDC85BQ15834 202 aaPredicted RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 TMEM200BQ69YZ2 307 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 CAPRIN2Q6IMN6 1127 aaKnown RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 Q7L0L9 218 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 CCDC84Q86UT8 332 aaPredicted RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 HAPLN4Q86UW8 402 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 BCL6BQ8N143 479 aaPredicted RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF485Q8NCK3 441 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 TMEM169Q96HH4 297 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 CALR3Q96L12 384 aaKnown RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 SLC9A7Q96T83 725 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 CPEB1Q9BZB8 566 aaKnown RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 IL23AQ9NPF7 189 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 NCKIPSDQ9NZQ3 722 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms