RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DDX39AO00148 427 aaKnown RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 MED24O75448 989 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 ECEL1O95672 775 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 AGTP01019 485 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 ECHS1P30084 290 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RFC4P35249 363 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 UBXN2AP68543 259 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 MYL7Q01449 175 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 MAPK7Q13164 816 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 CTTNQ14247 550 aaKnown RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 ZC2HC1CQ53FD0 456 aaPredicted RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 ADGRF4Q8IZF3 695 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 PPM1KQ8N3J5 372 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 TAB3Q8N5C8 712 aaPredicted RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 CCHCR1Q8TD31 782 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 ARHGEF26Q96DR7 871 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 MTMR9Q96QG7 549 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 PITPNM3Q9BZ71 974 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 CPSF2Q9P2I0 782 aaKnown RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 CTNNAL1Q9UBT7 734 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 TCEAL9Q9UHQ7 104 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 TOM1O60784 492 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 SPAG7O75391 227 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 FGRP09769 529 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 GHRP10912 638 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 SOX5P35711 763 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RPL21P46778 160 aaKnown RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 CCNHP51946 323 aaPredicted RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 ZBTB16Q05516 673 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 SLMAPQ14BN4 828 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 MUM1Q2TAK8 710 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 WLSQ5T9L3 541 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 ZNF365Q70YC5 407 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 CROCCP2Q86T23 111 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 OSBPL1AQ9BXW6 950 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 USP40Q9NVE5 1235 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 TAS2R14Q9NYV8 317 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RGL1Q9NZL6 768 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 AGAP1Q9UPQ3 857 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RABGAP1Q9Y3P9 1069 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 AKAP11Q9UKA4 1901 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 WDR91A4D1P6 747 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 PPP1R12AO14974 1030 aaPredicted RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 PSMC2P35998 433 aaKnown RBP9.75□□□□□ -0.85
COPB1-202ENST00000439561 MARCKSL1P49006 195 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RAD23BP54727 409 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 COPS2P61201 443 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 ITPK1Q13572 414 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 KYNUQ16719 465 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 SGO2Q562F6 1265 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 PPP4R3CPQ6ZMV5 832 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 FAM178BQ8IXR5 827 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 KRT35Q92764 455 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 RUNDC3BQ96NL0 473 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 SLAIN2Q9P270 581 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 USTQ9Y2C2 406 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 MYH7P12883 1935 aa9.75□□□□□ -0.85
COPB1-202ENST00000439561 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 FAM196BA6NMK8 535 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 C21orf2O43822 256 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 MGRN1O60291 552 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 KRT16P08779 473 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 AKR1B1P15121 316 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 HOXA13P31271 388 aaPredicted RBP9.74□□□□□ -0.85
COPB1-202ENST00000439561 MSH2P43246 934 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 PTENP60484 403 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 TCP10Q12799 353 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 TBC1D9BQ66K14 1250 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 FRMD5Q7Z6J6 570 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 LRRC57Q8N9N7 239 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 POP1Q99575 1024 aaKnown RBP9.74□□□□□ -0.85
COPB1-202ENST00000439561 PAGR1Q9BTK6 254 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 HEMGNQ9BXL5 484 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 INTUQ9ULD6 942 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 PNMA6FA0A0J9YX94 578 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 GNPATO15228 680 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 BCRP11274 1271 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 KRT5P13647 590 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 CREB1P16220 341 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 ALDH3A1P30838 453 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 ITIH4Q14624 930 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 ASPRV1Q53RT3 343 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 ODR4Q5SWX8 454 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 SLC51AQ86UW1 340 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 CCDC127Q96BQ5 260 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 ZNF653Q96CK0 615 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 RAB3IPQ96QF0 476 aaPredicted RBP9.74□□□□□ -0.85
COPB1-202ENST00000439561 ANO3Q9BYT9 981 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 BCAS3Q9H6U6 928 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 AJAP1Q9UKB5 411 aaPredicted RBP9.74□□□□□ -0.85
COPB1-202ENST00000439561 KCPQ6ZWJ8 1503 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 LRRD1A4D1F6 860 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 COMTP21964 271 aa9.74□□□□□ -0.85
COPB1-202ENST00000439561 CHRNA3P32297 505 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms