RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 GPR37O15354 613 aa5.35□□□□□ -1.55
CCDC30-203ENST00000428554 OXER1Q8TDS5 423 aa5.35□□□□□ -1.55
CCDC30-203ENST00000428554 PRIM1P49642 420 aaKnown RBP5.34□□□□□ -1.56
CCDC30-203ENST00000428554 SLAIN1Q8ND83 568 aa5.34□□□□□ -1.56
CCDC30-203ENST00000428554 DDX12PQ92771 950 aa5.34□□□□□ -1.56
CCDC30-203ENST00000428554 OSBPP22059 807 aa5.33□□□□□ -1.56
CCDC30-203ENST00000428554 POTEGQ6S5H5 508 aa5.33□□□□□ -1.56
CCDC30-203ENST00000428554 GPBP1L1Q9HC44 474 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-203ENST00000428554 TMCO4Q5TGY1 634 aa5.32□□□□□ -1.56
CCDC30-203ENST00000428554 KRI1Q8N9T8 703 aaKnown RBP5.32□□□□□ -1.56
CCDC30-203ENST00000428554 ARID3CA6NKF2 412 aa5.32□□□□□ -1.56
CCDC30-203ENST00000428554 AK7Q96M32 723 aa5.32□□□□□ -1.56
CCDC30-203ENST00000428554 MFAP1P55081 439 aaKnown RBP5.32□□□□□ -1.56
CCDC30-203ENST00000428554 RSPH4AQ5TD94 716 aa5.32□□□□□ -1.56
CCDC30-203ENST00000428554 NUTM2FA1L443 756 aa5.31□□□□□ -1.56
CCDC30-203ENST00000428554 E9PSI1 815 aa5.31□□□□□ -1.56
CCDC30-203ENST00000428554 EVI5O60447 810 aa5.31□□□□□ -1.56
CCDC30-203ENST00000428554 TAF7LQ5H9L4 462 aa5.31□□□□□ -1.56
CCDC30-203ENST00000428554 A6NJR5 290 aa5.3□□□□□ -1.56
CCDC30-203ENST00000428554 PTGER2P43116 358 aa5.3□□□□□ -1.56
CCDC30-203ENST00000428554 TRIM66O15016 1216 aa5.3□□□□□ -1.56
CCDC30-203ENST00000428554 FECHP22830 423 aa5.3□□□□□ -1.56
CCDC30-203ENST00000428554 RBM25P49756 843 aaKnown RBP5.3□□□□□ -1.56
CCDC30-203ENST00000428554 PTCD2Q8WV60 388 aaKnown RBP5.29□□□□□ -1.56
CCDC30-203ENST00000428554 FLIIQ13045 1269 aa5.29□□□□□ -1.56
CCDC30-203ENST00000428554 DHX37Q8IY37 1157 aaKnown RBP5.29□□□□□ -1.56
CCDC30-203ENST00000428554 CCDC82Q8N4S0 544 aa5.29□□□□□ -1.56
CCDC30-203ENST00000428554 SNPHO15079 494 aa5.28□□□□□ -1.56
CCDC30-203ENST00000428554 TBC1D12O60347 775 aa5.28□□□□□ -1.56
CCDC30-203ENST00000428554 PDE4DQ08499 809 aa5.28□□□□□ -1.56
CCDC30-203ENST00000428554 FOXD4L5Q5VV16 416 aaPredicted RBP5.27□□□□□ -1.57
CCDC30-203ENST00000428554 FAM177A1Q8N128 213 aaPredicted RBP5.27□□□□□ -1.57
CCDC30-203ENST00000428554 FOXD4L4Q8WXT5 416 aaPredicted RBP5.27□□□□□ -1.57
CCDC30-203ENST00000428554 ZNF428Q96B54 188 aa5.27□□□□□ -1.57
CCDC30-203ENST00000428554 AMOTL2Q9Y2J4 779 aa5.27□□□□□ -1.57
CCDC30-203ENST00000428554 KDM4CQ9H3R0 1056 aa5.27□□□□□ -1.57
CCDC30-203ENST00000428554 SLC34A2O95436 690 aa5.27□□□□□ -1.57
CCDC30-203ENST00000428554 BCCIPQ9P287 314 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC30-203ENST00000428554 TRAK2O60296 914 aa5.26□□□□□ -1.57
CCDC30-203ENST00000428554 CCDC102AQ96A19 550 aa5.26□□□□□ -1.57
CCDC30-203ENST00000428554 ANO8Q9HCE9 1232 aaPredicted RBP5.26□□□□□ -1.57
CCDC30-203ENST00000428554 IL27Q8NEV9 243 aa5.26□□□□□ -1.57
CCDC30-203ENST00000428554 CDHR5Q9HBB8 845 aa5.26□□□□□ -1.57
CCDC30-203ENST00000428554 IRF6O14896 467 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 GNPATO15228 680 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 CANXP27824 592 aaKnown RBP5.25□□□□□ -1.57
CCDC30-203ENST00000428554 MAP2K5Q13163 448 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 CCDC125Q86Z20 511 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 MINK1Q8N4C8 1332 aaPredicted RBP5.25□□□□□ -1.57
CCDC30-203ENST00000428554 PDE4CQ08493 712 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 PTGDRQ13258 359 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 ILDR2Q71H61 639 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 FCHSD2O94868 740 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 PCDHGA4Q9Y5G9 962 aa5.25□□□□□ -1.57
CCDC30-203ENST00000428554 DOK7Q18PE1 504 aa5.24□□□□□ -1.57
CCDC30-203ENST00000428554 GZF1Q9H116 711 aaPredicted RBP5.24□□□□□ -1.57
CCDC30-203ENST00000428554 ONECUT3O60422 494 aaPredicted RBP5.24□□□□□ -1.57
CCDC30-203ENST00000428554 HIC1Q14526 733 aa5.24□□□□□ -1.57
CCDC30-203ENST00000428554 RBM33Q96EV2 1170 aaKnown RBP5.24□□□□□ -1.57
CCDC30-203ENST00000428554 NPDC1Q9NQX5 325 aaPredicted RBP5.24□□□□□ -1.57
CCDC30-203ENST00000428554 PCDHGA10Q9Y5H3 936 aa5.24□□□□□ -1.57
CCDC30-203ENST00000428554 KDM4FA0A1W2PPD8 638 aa5.23□□□□□ -1.57
CCDC30-203ENST00000428554 RIMBP2O15034 1052 aa5.23□□□□□ -1.57
CCDC30-203ENST00000428554 TSR1Q2NL82 804 aaKnown RBP5.23□□□□□ -1.57
CCDC30-203ENST00000428554 AEBP1Q8IUX7 1158 aa5.23□□□□□ -1.57
CCDC30-203ENST00000428554 FAM117AQ9C073 453 aa5.23□□□□□ -1.57
CCDC30-203ENST00000428554 EN1Q05925 392 aaPredicted RBP5.22□□□□□ -1.57
CCDC30-203ENST00000428554 CC2D2BQ6DHV5 1058 aa5.22□□□□□ -1.57
CCDC30-203ENST00000428554 KHSRPQ92945 711 aaKnown RBP eCLIP5.22□□□□□ -1.57
CCDC30-203ENST00000428554 PATL2C9JE40 543 aaKnown RBP5.22□□□□□ -1.57
CCDC30-203ENST00000428554 HOXB3P14651 431 aaPredicted RBP5.22□□□□□ -1.57
CCDC30-203ENST00000428554 PARP9Q8IXQ6 854 aa5.22□□□□□ -1.57
CCDC30-203ENST00000428554 IGSF5Q9NSI5 407 aa5.22□□□□□ -1.57
CCDC30-203ENST00000428554 ZNF316A6NFI3 1004 aaPredicted RBP5.22□□□□□ -1.57
CCDC30-203ENST00000428554 MAP3K7O43318 606 aa5.22□□□□□ -1.57
CCDC30-203ENST00000428554 PHF14O94880 888 aa5.22□□□□□ -1.57
CCDC30-203ENST00000428554 FAM163AQ96GL9 167 aaPredicted RBP5.22□□□□□ -1.57
CCDC30-203ENST00000428554 ZNF710Q8N1W2 664 aa5.21□□□□□ -1.58
CCDC30-203ENST00000428554 AMHR2Q16671 573 aa5.21□□□□□ -1.58
CCDC30-203ENST00000428554 ZSWIM6Q9HCJ5 1215 aa5.21□□□□□ -1.58
CCDC30-203ENST00000428554 USP35Q9P2H5 1018 aa5.2□□□□□ -1.58
CCDC30-203ENST00000428554 PLEKHG3A1L390 1219 aa5.2□□□□□ -1.58
CCDC30-203ENST00000428554 EPAS1Q99814 870 aa5.2□□□□□ -1.58
CCDC30-203ENST00000428554 REPIN1Q9BWE0 567 aaKnown RBP5.2□□□□□ -1.58
CCDC30-203ENST00000428554 ST18O60284 1047 aa5.2□□□□□ -1.58
CCDC30-203ENST00000428554 SERPINA10Q9UK55 444 aa5.2□□□□□ -1.58
CCDC30-203ENST00000428554 FAM161AQ3B820 660 aa5.19□□□□□ -1.58
CCDC30-203ENST00000428554 ARSIQ5FYB1 569 aa5.19□□□□□ -1.58
CCDC30-203ENST00000428554 TICAM2Q86XR7 235 aa5.19□□□□□ -1.58
CCDC30-203ENST00000428554 PHOX2BQ99453 314 aa5.19□□□□□ -1.58
CCDC30-203ENST00000428554 NUDT7P0C024 238 aa5.19□□□□□ -1.58
CCDC30-203ENST00000428554 TYW1BQ6NUM6 668 aa5.19□□□□□ -1.58
CCDC30-203ENST00000428554 FOSBP53539 338 aa5.18□□□□□ -1.58
CCDC30-203ENST00000428554 IRF5Q13568 498 aa5.18□□□□□ -1.58
CCDC30-203ENST00000428554 JPH4Q96JJ6 628 aa5.18□□□□□ -1.58
CCDC30-203ENST00000428554 POLR3GLQ9BT43 218 aa5.18□□□□□ -1.58
CCDC30-203ENST00000428554 TTLL12Q14166 644 aaPredicted RBP5.17□□□□□ -1.58
CCDC30-203ENST00000428554 FAM9AQ8IZU1 332 aaPredicted RBP5.17□□□□□ -1.58
CCDC30-203ENST00000428554 NEFLP07196 543 aa5.17□□□□□ -1.58
CCDC30-203ENST00000428554 MS4A1P11836 297 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms