RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
NCLN-201ENST00000246117 APBB1O00213 710 aa17.69■□□□□ 0.42
NCLN-201ENST00000246117 COG6Q9Y2V7 657 aa17.69■□□□□ 0.42
NCLN-201ENST00000246117 FANCIQ9NVI1 1328 aa17.69■□□□□ 0.42
NCLN-201ENST00000246117 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
NCLN-201ENST00000246117 GZF1Q9H116 711 aaPredicted RBP17.67■□□□□ 0.42
NCLN-201ENST00000246117 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.67■□□□□ 0.42
NCLN-201ENST00000246117 TMEM132EQ6IEE7 984 aa17.66■□□□□ 0.42
NCLN-201ENST00000246117 ELL2O00472 640 aaPredicted RBP17.66■□□□□ 0.42
NCLN-201ENST00000246117 BECN1Q14457 450 aa17.65■□□□□ 0.42
NCLN-201ENST00000246117 CFAP70Q5T0N1 1121 aa17.63■□□□□ 0.41
NCLN-201ENST00000246117 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
NCLN-201ENST00000246117 ARID4BQ4LE39 1312 aaPredicted RBP17.62■□□□□ 0.41
NCLN-201ENST00000246117 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
NCLN-201ENST00000246117 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
NCLN-201ENST00000246117 KANK1Q14678 1352 aa17.62■□□□□ 0.41
NCLN-201ENST00000246117 DAPK1P53355 1430 aa17.61■□□□□ 0.41
NCLN-201ENST00000246117 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
NCLN-201ENST00000246117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
NCLN-201ENST00000246117 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
NCLN-201ENST00000246117 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
NCLN-201ENST00000246117 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
NCLN-201ENST00000246117 EFCAB5A4FU69 1503 aa17.59■□□□□ 0.41
NCLN-201ENST00000246117 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
NCLN-201ENST00000246117 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
NCLN-201ENST00000246117 GRIN2BQ13224 1484 aa17.58■□□□□ 0.4
NCLN-201ENST00000246117 C20orf194Q5TEA3 1177 aa17.58■□□□□ 0.4
NCLN-201ENST00000246117 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
NCLN-201ENST00000246117 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
NCLN-201ENST00000246117 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
NCLN-201ENST00000246117 CENPJQ9HC77 1338 aaPredicted RBP17.57■□□□□ 0.4
NCLN-201ENST00000246117 MFAP1P55081 439 aaKnown RBP17.57■□□□□ 0.4
NCLN-201ENST00000246117 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
NCLN-201ENST00000246117 WASHC2CQ9Y4E1 1318 aa17.57■□□□□ 0.4
NCLN-201ENST00000246117 ABCC5O15440 1437 aa17.57■□□□□ 0.4
NCLN-201ENST00000246117 SMC4Q9NTJ3 1288 aa17.56■□□□□ 0.4
NCLN-201ENST00000246117 BCAR3O75815 825 aa17.56■□□□□ 0.4
NCLN-201ENST00000246117 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
NCLN-201ENST00000246117 EHBP1L1Q8N3D4 1523 aa17.55■□□□□ 0.4
NCLN-201ENST00000246117 RSPH4AQ5TD94 716 aa17.55■□□□□ 0.4
NCLN-201ENST00000246117 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
NCLN-201ENST00000246117 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
NCLN-201ENST00000246117 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
NCLN-201ENST00000246117 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
NCLN-201ENST00000246117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.44e-8■■■■□ 22.9
NCLN-201ENST00000246117 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
NCLN-201ENST00000246117 PPP2R1AP30153 589 aa17.51■□□□□ 0.39
NCLN-201ENST00000246117 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
NCLN-201ENST00000246117 MIA2Q96PC5 1412 aa17.51■□□□□ 0.39
NCLN-201ENST00000246117 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
NCLN-201ENST00000246117 SUPT6HQ7KZ85 1726 aaKnown RBP17.5■□□□□ 0.39
NCLN-201ENST00000246117 LMOD2Q6P5Q4 547 aa17.5■□□□□ 0.39
NCLN-201ENST00000246117 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
NCLN-201ENST00000246117 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
NCLN-201ENST00000246117 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
NCLN-201ENST00000246117 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
NCLN-201ENST00000246117 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
NCLN-201ENST00000246117 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
NCLN-201ENST00000246117 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
NCLN-201ENST00000246117 HSP90AB1P08238 724 aaKnown RBP17.46■□□□□ 0.39
NCLN-201ENST00000246117 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
NCLN-201ENST00000246117 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
NCLN-201ENST00000246117 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
NCLN-201ENST00000246117 MTHFSP49914 203 aa17.44■□□□□ 0.38
NCLN-201ENST00000246117 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
NCLN-201ENST00000246117 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
NCLN-201ENST00000246117 E9PSI1 815 aa17.42■□□□□ 0.38
NCLN-201ENST00000246117 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
NCLN-201ENST00000246117 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
NCLN-201ENST00000246117 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
NCLN-201ENST00000246117 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
NCLN-201ENST00000246117 HMOX1P09601 288 aa17.4■□□□□ 0.38
NCLN-201ENST00000246117 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
NCLN-201ENST00000246117 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
NCLN-201ENST00000246117 BACH2Q9BYV9 841 aa17.4■□□□□ 0.38
NCLN-201ENST00000246117 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
NCLN-201ENST00000246117 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.38
NCLN-201ENST00000246117 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.38
NCLN-201ENST00000246117 HSCBQ8IWL3 235 aa17.39■□□□□ 0.38
NCLN-201ENST00000246117 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
NCLN-201ENST00000246117 CAMSAP2Q08AD1 1489 aa17.39■□□□□ 0.37
NCLN-201ENST00000246117 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
NCLN-201ENST00000246117 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
NCLN-201ENST00000246117 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
NCLN-201ENST00000246117 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
NCLN-201ENST00000246117 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
NCLN-201ENST00000246117 NOL8Q76FK4 1167 aaKnown RBP17.37■□□□□ 0.37
NCLN-201ENST00000246117 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
NCLN-201ENST00000246117 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
NCLN-201ENST00000246117 FOXD4L5Q5VV16 416 aaPredicted RBP17.36■□□□□ 0.37
NCLN-201ENST00000246117 FOXD4L4Q8WXT5 416 aaPredicted RBP17.36■□□□□ 0.37
NCLN-201ENST00000246117 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
NCLN-201ENST00000246117 KIAA0586Q9BVV6 1533 aa17.36■□□□□ 0.37
NCLN-201ENST00000246117 A0A0G2JS52 829 aa17.35■□□□□ 0.37
NCLN-201ENST00000246117 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
NCLN-201ENST00000246117 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
NCLN-201ENST00000246117 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
NCLN-201ENST00000246117 MS4A1P11836 297 aa17.34■□□□□ 0.37
NCLN-201ENST00000246117 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
NCLN-201ENST00000246117 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms