RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ALG1Q9BT22 464 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 EPN3Q9H201 632 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 SERHL2Q9H4I8 314 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 IL23AQ9NPF7 189 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 SYBUQ9NX95 663 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 ANKFY1Q9P2R3 1169 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 TRAF6Q9Y4K3 522 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 EPN1Q9Y6I3 576 aaPredicted RBP2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 PRAMEF22A3QJZ6 481 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 GOLGA8BA8MQT2 603 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 AHRRA9YTQ3 701 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ZNF561-AS1K7EIQ3 104 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 AGRPO00253 132 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 SCAMP3O14828 347 aaKnown RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 WNT9AO14904 365 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 MFAP3LO75121 409 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 SCAF4O95104 1147 aaKnown RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 PABPC1P11940 636 aaKnown RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ANTXR2P58335 489 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 FAM189BP81408 668 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 PAK1Q13153 545 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 TCIRG1Q13488 830 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 HSP90AA2PQ14568 343 aaPredicted RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 FXNQ16595 210 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 PRR16Q569H4 304 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 YOD1Q5VVQ6 348 aaPredicted RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 NSMFQ6X4W1 530 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 MAMDC2Q7Z304 686 aaPredicted RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ZC3H7AQ8IWR0 971 aaKnown RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 PCDH19Q8TAB3 1148 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ASB15Q8WXK1 588 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 GCDHQ92947 438 aaPredicted RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ZNF512Q96ME7 567 aaPredicted RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 LRFN3Q9BTN0 628 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 WDR11Q9BZH6 1224 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 SMURF1Q9HCE7 757 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ALG13Q9NP73 1137 aaKnown RBP2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 ARHGEF4Q9NR80 690 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 CATSPERZQ9NTU4 200 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 INSL6Q9Y581 213 aa2.63□□□□□ -1.99
RNU6-239P-201ENST00000390990 POLR2AP24928 1970 aaKnown RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 DNAJC9-AS1A6NH13 148 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 RASSF10A6NK89 507 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 CLASP2O75122 1294 aaKnown RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 PPFIA4O75335 1185 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 H2AFYO75367 372 aaKnown RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 STC2O76061 302 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 RECKO95980 971 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 FGFR1P11362 822 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 LAG3P18627 525 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 HK1P19367 917 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 APEX1P27695 318 aaKnown RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 PLA2G5P39877 138 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 USP14P54578 494 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 FOXF2Q12947 444 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 FOXI1Q12951 378 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 FSTL4Q6MZW2 842 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 CCDC62Q6P9F0 684 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 EP400NLQ6ZTU2 488 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 NT5DC4Q86YG4 428 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 BOLLQ8N9W6 283 aaKnown RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 SIMC1Q8NDZ2 872 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 SUPT20HQ8NEM7 779 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 ANKS1AQ92625 1134 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 FBXW5Q969U6 566 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 MYEOVQ96EZ4 313 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 GBP4Q96PP9 640 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 AARSD1Q9BTE6 412 aaKnown RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 BRIP1Q9BX63 1249 aa2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 GZF1Q9H116 711 aaPredicted RBP2.62□□□□□ -1.99
RNU6-239P-201ENST00000390990 MAFO75444 373 aaPredicted RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 IPO13O94829 963 aaKnown RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 ATF4P18848 351 aaPredicted RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 ETFBP38117 255 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 SEC24CP53992 1094 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 SESN2P58004 480 aaPredicted RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 MAPK7Q13164 816 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 TNNI3KQ59H18 835 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 MFSD5Q6N075 450 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 C16orf59Q7L2K0 433 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 SRRM1Q8IYB3 904 aaKnown RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 CMTR2Q8IYT2 770 aaKnown RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 ZNF366Q8N895 744 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 HIPK4Q8NE63 616 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 ST8SIA2Q92186 375 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 NKD2Q969F2 451 aaPredicted RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 GFM2Q969S9 779 aaKnown RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 ACBD3Q9H3P7 528 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 SAE1Q9UBE0 346 aaPredicted RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 PRKAG3Q9UGI9 489 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 RCAN3Q9UKA8 241 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 DENND2AQ9ULE3 1009 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 PCDHA8Q9Y5H6 950 aa2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 ARHGEF17Q96PE2 2063 aaPredicted RBP2.61□□□□□ -1.99
RNU6-239P-201ENST00000390990 SETD1BQ9UPS6 1966 aaKnown RBP2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 TMEM200CA6NKL6 621 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 GOLGA6L22H0YM25 854 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 SCDO00767 359 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 IKBKBO14920 756 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms