RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SCLYQ96I15 445 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 LBHD1Q9BQE6 289 aaPredicted RBP14.99□□□□□ -0.01
CDH1-204ENST00000562118 JPH2Q9BR39 696 aaPredicted RBP14.99□□□□□ -0.01
CDH1-204ENST00000562118 OSBPL7Q9BZF2 842 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 ADAMTS10Q9H324 1103 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 CHD9Q3L8U1 2897 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 SPTLC2O15270 562 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 DGAT1O75907 488 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
CDH1-204ENST00000562118 CCT6AP40227 531 aaKnown RBP14.98□□□□□ -0.01
CDH1-204ENST00000562118 CCL23P55773 120 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 DRP2Q13474 957 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 PLEKHG4Q58EX7 1191 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 TMEM240Q5SV17 173 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 EFCAB12Q6NXP0 572 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 PSRC1Q6PGN9 363 aaPredicted RBP14.98□□□□□ -0.01
CDH1-204ENST00000562118 KCNK18Q7Z418 384 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 RSPH3Q86UC2 560 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 KRI1Q8N9T8 703 aaKnown RBP14.98□□□□□ -0.01
CDH1-204ENST00000562118 RETREG2Q8NC44 543 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 KCNG4Q8TDN1 519 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 PIGOQ8TEQ8 1089 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 NT5C3AQ9H0P0 336 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 CSRNP2Q9H175 543 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 TRPV2Q9Y5S1 764 aa14.98□□□□□ -0.01
CDH1-204ENST00000562118 COL4A6Q14031 1691 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 EYA4O95677 639 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 MARCKSP29966 332 aaPredicted RBP14.97□□□□□ -0.01
CDH1-204ENST00000562118 CLCN3P51790 818 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 EMC2Q15006 297 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 FBXO47Q5MNV8 452 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 IER5Q5VY09 327 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 RPUSD2Q8IZ73 545 aaKnown RBP14.97□□□□□ -0.01
CDH1-204ENST00000562118 USP38Q8NB14 1042 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 HERVK_113Q902F9 699 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDH1-204ENST00000562118 SH2D3AQ9BRG2 576 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 CELF4Q9BZC1 486 aaKnown RBP14.97□□□□□ -0.01
CDH1-204ENST00000562118 DDX19AQ9NUU7 478 aaKnown RBP14.97□□□□□ -0.01
CDH1-204ENST00000562118 KIAA1024Q9UPX6 916 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 ATP6V1DQ9Y5K8 247 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 CDY2AQ9Y6F7 541 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 TRIOBPQ9H2D6 2365 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 GBF1Q92538 1859 aa14.97□□□□□ -0.01
CDH1-204ENST00000562118 SZT2Q5T011 3432 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 TMOD1P28289 359 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 ARL2P36404 184 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 GPC3P51654 580 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 CDC42EP1Q00587 391 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 LPIN1Q14693 890 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 TCTN1Q2MV58 587 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 TSHZ1Q6ZSZ6 1077 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 USP49Q70CQ1 688 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 CABP7Q86V35 215 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 TDHQ8IZJ6 230 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 LRRC71Q8N4P6 559 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 SYMPKQ92797 1274 aaKnown RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 CLIC6Q96NY7 704 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 FAM49AQ9H0Q0 323 aaPredicted RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 BLOC1S4Q9NUP1 217 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 TFIP11Q9UBB9 837 aaKnown RBP14.96□□□□□ -0.01
CDH1-204ENST00000562118 MYH11P35749 1972 aa14.96□□□□□ -0.01
CDH1-204ENST00000562118 CUTAO60888 179 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 BAIAP3O94812 1187 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 CYP11B2P19099 503 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 POLGP54098 1239 aaPredicted RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 SLC12A3P55017 1021 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 CEBPZQ03701 1054 aaKnown RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 STK38Q15208 465 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 NAALADL2Q58DX5 795 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 C9orf50Q5SZB4 431 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 CNKSR3Q6P9H4 555 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 C1orf186Q6ZWK4 172 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 TRMT1LQ7Z2T5 733 aaKnown RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 ZNF410Q86VK4 478 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 SYT2Q8N9I0 419 aaPredicted RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 LEO1Q8WVC0 666 aaPredicted RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 TMEM40Q8WWA1 233 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 KCNN1Q92952 543 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 EPSTI1Q96J88 318 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 MAP7D2Q96T17 732 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 MTRQ99707 1265 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 NFKBIZQ9BYH8 718 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 CDHR5Q9HBB8 845 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 ATP6V0A4Q9HBG4 840 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 KCND2Q9NZV8 630 aa14.95□□□□□ -0.02
CDH1-204ENST00000562118 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 RBM19Q9Y4C8 960 aaKnown RBP14.95□□□□□ -0.02
CDH1-204ENST00000562118 TTC3P53804 2025 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms