RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 GJA10Q969M2 543 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 TOP1MTQ969P6 601 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 SCLT1Q96NL6 688 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 NACC1Q96RE7 527 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 LXNQ9BS40 222 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 POLR3CQ9BUI4 534 aaPredicted RBP8.78□□□□□ -1
PSEN1-222ENST00000557356 GCOM2Q9BZD3 368 aaPredicted RBP8.78□□□□□ -1
PSEN1-222ENST00000557356 C1orf112Q9NSG2 853 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
PSEN1-222ENST00000557356 IGKV6-21A0A0C4DH24 114 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 ENPP3O14638 875 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 DGAT1O75907 488 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 STBD1O95210 358 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 GJB5O95377 273 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 RPA1P27694 616 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 TECP42680 631 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 FXR2P51116 673 aaKnown RBP eCLIP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 NLRP11P59045 1033 aaKnown RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 NCBP1Q09161 790 aaKnown RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 NFX1Q12986 1120 aaKnown RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 PTGDRQ13258 359 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 MXD4Q14582 209 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 UGCGQ16739 394 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 XKR9Q5GH70 373 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 KRT79Q5XKE5 535 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 PPP2R2DQ66LE6 453 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 ANO5Q75V66 913 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 MYOCDQ8IZQ8 938 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 PSPC1Q8WXF1 523 aaKnown RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 RSPH1Q8WYR4 309 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 DYDC2Q96IM9 177 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 SAMD11Q96NU1 681 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 GAS2L1Q99501 681 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 ZSCAN16Q9H4T2 348 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 CHST12Q9NRB3 414 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 DACT1Q9NYF0 836 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 RGL1Q9NZL6 768 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 SUCLA2Q9P2R7 463 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 LRWD1Q9UFC0 647 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 KCNG1Q9UIX4 513 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 DBR1Q9UK59 544 aaKnown RBP8.77□□□□□ -1.01
PSEN1-222ENST00000557356 PADI3Q9ULW8 664 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 GINS2Q9Y248 185 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 STXBP5LQ9Y2K9 1186 aa8.77□□□□□ -1.01
PSEN1-222ENST00000557356 DENND3A2RUS2 1198 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 SLC26A4O43511 780 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 GPR32O75388 356 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 VTNP04004 478 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 SKIP12755 728 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 CD52P31358 61 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 CLCN3P51790 818 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 CYP4A11Q02928 519 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 TMEM62Q0P6H9 643 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 TFDP1Q14186 410 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 CTTNQ14247 550 aaKnown RBP8.76□□□□□ -1.01
PSEN1-222ENST00000557356 KIZQ2M2Z5 673 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 SLC24A5Q71RS6 500 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 SRGAP1Q7Z6B7 1085 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 LINC01465Q8N7H1 131 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 MCPH1Q8NEM0 835 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 NLRP7Q8WX94 980 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 AK8Q96MA6 479 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 YME1L1Q96TA2 773 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 MTRQ99707 1265 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 TSPYL2Q9H2G4 693 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-222ENST00000557356 TMEM60Q9H2L4 133 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 NKX2-4Q9H2Z4 354 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 DHX33Q9H6R0 707 aaKnown RBP8.76□□□□□ -1.01
PSEN1-222ENST00000557356 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.76□□□□□ -1.01
PSEN1-222ENST00000557356 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 RWDD3Q9Y3V2 267 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 PCDHB7Q9Y5E2 793 aa8.76□□□□□ -1.01
PSEN1-222ENST00000557356 DOCK5Q9H7D0 1870 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 CARNS1A5YM72 827 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 GRXCR1A8MXD5 290 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 HOXA2O43364 376 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 DARSP14868 501 aaKnown RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 SFPQP23246 707 aaKnown RBP eCLIP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 CCT6AP40227 531 aaKnown RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 PBX2P40425 430 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 TOB1P50616 345 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 GPC3P51654 580 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 RABGGTBP53611 331 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 NPEPPSP55786 919 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 HTRA4P83105 476 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 CATSPER3Q86XQ3 398 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 RHPN2Q8IUC4 686 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 NPAS4Q8IUM7 802 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 LRRC71Q8N4P6 559 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 C4orf32Q8N8J7 132 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 IGSF22Q8N9C0 903 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 TGS1Q96RS0 853 aaKnown RBP8.75□□□□□ -1.01
PSEN1-222ENST00000557356 CEP89Q96ST8 783 aa8.75□□□□□ -1.01
PSEN1-222ENST00000557356 CDX2Q99626 313 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms