RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 GLULP15104 373 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 LMNB2Q03252 620 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 GPR149Q86SP6 731 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 CABP7Q86V35 215 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 SLC39A11Q8N1S5 342 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 GPR161Q8N6U8 529 aaKnown RBP15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 ENAHQ8N8S7 591 aaPredicted RBP15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 SLC22A17Q8WUG5 538 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 FAM227BQ96M60 508 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 PCYT2Q99447 389 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 HELLSQ9NRZ9 838 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 PKD1L2Q7Z442 2459 aa15.77■□□□□ 0.11
EXOSC3-207ENST00000490516 LAMA4Q16363 1823 aa15.77■□□□□ 0.11
EXOSC3-207ENST00000490516 ZMYM6O95789 1325 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 DOCK8Q8NF50 2099 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 A0A0D9SFI3 127 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 NT5C1B-RDH14C9J2C7 533 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 LRRN2O75325 713 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 KCNA2P16389 499 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 FAM189BP81408 668 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 SLC35G1Q2M3R5 365 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 LRRC43Q8N309 656 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 GIMAP8Q8ND71 665 aaPredicted RBP15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 GPR152Q8TDT2 470 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 ZSCAN10Q96SZ4 725 aaPredicted RBP15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 PKD2L1Q9P0L9 805 aa15.76■□□□□ 0.11
EXOSC3-207ENST00000490516 SMIM35A0A1B0GVV1 85 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 ACAP1Q15027 740 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 CCDC178Q5BJE1 867 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 PPM1JQ5JR12 505 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 PCNX4Q63HM2 1172 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 PHLDB3Q6NSJ2 640 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 ZNF589Q86UQ0 364 aaPredicted RBP15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 NME8Q8N427 588 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 SLC44A3Q8N4M1 653 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 TMEM87AQ8NBN3 555 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 PIGSQ96S52 555 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 FOXQ1Q9C009 403 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 DCTPP1Q9H773 170 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 ELAC1Q9H777 363 aaKnown RBP15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 SFXN1Q9H9B4 322 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 USP18Q9UMW8 372 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 COL4A3Q01955 1670 aa15.75■□□□□ 0.11
EXOSC3-207ENST00000490516 TGM1P22735 817 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 LETM2Q2VYF4 491 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 MTHFD1LQ6UB35 978 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 NLRX1Q86UT6 975 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 VPS52Q8N1B4 723 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 PPP1R16BQ96T49 567 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 ZBP1Q9H171 429 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 SH2B1Q9NRF2 756 aaPredicted RBP15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 MAD2L2Q9UI95 211 aa15.74■□□□□ 0.11
EXOSC3-207ENST00000490516 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 B4E1Z4 1266 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 GPR182O15218 404 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 SPTLC1O15269 473 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 SRFP11831 508 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 DSC3Q14574 896 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 MCMDC2Q4G0Z9 681 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 FAM228AQ86W67 206 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 ABI1Q8IZP0 508 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 PJA1Q8NG27 643 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 PARD6AQ9NPB6 346 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 ARHGEF3Q9NR81 526 aa15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 SMG5Q9UPR3 1016 aaKnown RBP15.73■□□□□ 0.11
EXOSC3-207ENST00000490516 HOXA2O43364 376 aa15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 GBP2P32456 591 aaPredicted RBP15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 ZNF528Q3MIS6 628 aa15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 CLLU1OSQ5K130 101 aa15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 TMEM173Q86WV6 379 aaPredicted RBP15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 SECISBP2LQ93073 1101 aaKnown RBP15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 FASNP49327 2511 aaKnown RBP15.72■□□□□ 0.11
EXOSC3-207ENST00000490516 MYH15Q9Y2K3 1946 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 KLRC1P26715 233 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 BCAR1P56945 870 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 CSTF1Q05048 431 aaKnown RBP15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 NONOQ15233 471 aaKnown RBP eCLIP15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 PTPN14Q15678 1187 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 KIZQ2M2Z5 673 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 DCLRE1AQ6PJP8 1040 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 FAM43BQ6ZT52 329 aaPredicted RBP15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 KIAA0319LQ8IZA0 1049 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 RNF169Q8NCN4 708 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 ATRIPQ8WXE1 791 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 GPRASP2Q96D09 838 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 TMEM169Q96HH4 297 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 OSMRQ99650 979 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 CHMP4BQ9H444 224 aaKnown RBP15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 AZI2Q9H6S1 392 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 SPATA6Q9NWH7 488 aaPredicted RBP15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 ZSWIM5Q9P217 1185 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 IRAK3Q9Y616 596 aa15.71■□□□□ 0.11
EXOSC3-207ENST00000490516 ANKRD11Q6UB99 2663 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms