RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 PLEKHM2Q8IWE5 1019 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 GALNT12Q8IXK2 581 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 MB21D1Q8N884 522 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 ATXN2LQ8WWM7 1075 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 JARID2Q92833 1246 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 NKD1Q969G9 470 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 SARAFQ96BY9 339 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 VCPIP1Q96JH7 1222 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 MEIS3Q99687 375 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 HEPHQ9BQS7 1158 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 SH2D3AQ9BRG2 576 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 PLA2G12AQ9BZM1 189 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZFYVE28Q9HCC9 887 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 LRIT1Q9P2V4 623 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 TBC1D2BQ9UPU7 963 aa-0.17□□□□□ -2.44
SNORA40.16-201ENST00000517238 A0A0B4J293 547 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 A0A1W2PRX2 142 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 UNC119BA6NIH7 251 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 ACOT8O14734 319 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 SGSM2O43147 1006 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 EXTL3O43909 919 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 TBC1D8O95759 1140 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 CRYABP02511 175 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 FGF3P11487 239 aaPredicted RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 PLA2G2AP14555 144 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 CERS1P27544 350 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 BCL6P41182 706 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 LMO4P61968 165 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 UBE3CQ15386 1083 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 HIST2H2BDQ6DRA6 164 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 TEPPQ6URK8 271 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 IGFL3Q6UXB1 125 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 DTHD1Q6ZMT9 781 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 RAPH1Q70E73 1250 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 MILR1Q7Z6M3 343 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 MRPL10Q7Z7H8 261 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 NANOGP1Q8N7R0 232 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 MDGA1Q8NFP4 955 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 CCDC74AQ96AQ1 378 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 RNF31Q96EP0 1072 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 TOE1Q96GM8 510 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 SCYL1Q96KG9 808 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 RHOVQ96L33 236 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 QTRT1Q9BXR0 403 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 MOV10L1Q9BXT6 1211 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 RTN4Q9NQC3 1192 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 CHST7Q9NS84 486 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 FAM120CQ9NX05 1096 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 SNCAIPQ9Y6H5 919 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 MAST3O60307 1309 aa-0.18□□□□□ -2.44
SNORA40.16-201ENST00000517238 IGKV3D-15A0A087WSY6 115 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 IGKV6-21A0A0C4DH24 114 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 KCNU1A8MYU2 1149 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 H3BNX3 289 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 TRIM24O15164 1050 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 LDB3O75112 727 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 NDUFA10O95299 355 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 ITGAMP11215 1152 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 CD19P15391 556 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 POLD1P28340 1107 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 CTSKP43235 329 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 FAM189BP81408 668 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 DPYDQ12882 1025 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 RIN1Q13671 783 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 RBM39Q14498 530 aaKnown RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 NFATC4Q14934 902 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 LRRC14Q15048 493 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 INPP5JQ15735 1006 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZNF239Q16600 458 aaKnown RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 FAM214AQ32MH5 1076 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 TMEM119Q4V9L6 283 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 PDZRN4Q6ZMN7 1036 aaPredicted RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 USP30Q70CQ3 517 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 SLC34A3Q8N130 599 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 FAM13CQ8NE31 585 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 OR14K1Q8NGZ2 314 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZNF398Q8TD17 642 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 ASB10Q8WXI3 467 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 HES6Q96HZ4 224 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 SLC46A2Q9BY10 475 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 CDCP1Q9H5V8 836 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 NCOA5Q9HCD5 579 aaKnown RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 TRNAU1APQ9NX07 287 aaKnown RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 DLL3Q9NYJ7 618 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZFP69BQ9UJL9 534 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 WASF3Q9UPY6 502 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 SAMM50Q9Y512 469 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 SQORQ9Y6N5 450 aa-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 ATXN2Q99700 1313 aaKnown RBP-0.19□□□□□ -2.44
SNORA40.16-201ENST00000517238 TTC3P53804 2025 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 ADAMTS9Q9P2N4 1935 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 PRR23AA6NEV1 266 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 SRRM3A6NNA2 597 aaPredicted RBP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 FGF10O15520 208 aaPredicted RBP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 CUTAO60888 179 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZNF883P0CG24 379 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 GLRBP48167 497 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 CDK8P49336 464 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 FXR1P51114 621 aaKnown RBP eCLIP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 YARSP54577 528 aaKnown RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms