RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 RAG1P15918 1043 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 THPOP40225 353 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 DNAJB3Q8WWF6 145 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
APTX-227ENST00000485479 POLD4Q9HCU8 107 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
APTX-227ENST00000485479 C22orf31O95567 290 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 NASPP49321 788 aaPredicted RBP13.29□□□□□ -0.28
APTX-227ENST00000485479 SLC26A2P50443 739 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 SLC39A14Q15043 492 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 MAEAQ7L5Y9 396 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 SERINC5Q86VE9 423 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 CEP170P1Q96L14 293 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 ZNF396Q96N95 335 aaPredicted RBP13.29□□□□□ -0.28
APTX-227ENST00000485479 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 SUGCTQ9HAC7 445 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 DDX19AQ9NUU7 478 aaKnown RBP13.29□□□□□ -0.28
APTX-227ENST00000485479 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 SIP14410 1827 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 E9PMD0 336 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 SPTLC2O15270 562 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 VTNP04004 478 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 CSF2RAP15509 400 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
APTX-227ENST00000485479 KARSQ15046 597 aaKnown RBP13.29□□□□□ -0.28
APTX-227ENST00000485479 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 ZNF618Q5T7W0 954 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 ARL6IP4Q66PJ3 421 aaKnown RBP13.29□□□□□ -0.28
APTX-227ENST00000485479 DEFB128Q7Z7B8 93 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 PANK2Q9BZ23 570 aa13.29□□□□□ -0.28
APTX-227ENST00000485479 MBLAC1A4D2B0 266 aaPredicted RBP13.28□□□□□ -0.28
APTX-227ENST00000485479 ACRP10323 421 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 CKBP12277 381 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 RPA1P27694 616 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 EPHB4P54760 987 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 PTPN11Q06124 597 aaPredicted RBP13.28□□□□□ -0.28
APTX-227ENST00000485479 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
APTX-227ENST00000485479 XKR9Q5GH70 373 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 KRT79Q5XKE5 535 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 C4orf19Q8IY42 314 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
APTX-227ENST00000485479 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 RAB34Q9BZG1 259 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 NR2E3Q9Y5X4 410 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 TET1Q8NFU7 2136 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 LOXHD1Q8IVV2 1947 aa13.28□□□□□ -0.28
APTX-227ENST00000485479 TBC1D8BQ0IIM8 1120 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 PDIA5Q14554 519 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 TARBP2Q15633 366 aaKnown RBP13.27□□□□□ -0.28
APTX-227ENST00000485479 HAUS3Q68CZ6 603 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 CABP7Q86V35 215 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 FAM167AQ96KS9 214 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.28
APTX-227ENST00000485479 PNMA5Q96PV4 448 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 NRBP2Q9NSY0 501 aa13.27□□□□□ -0.28
APTX-227ENST00000485479 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 KIAA0355O15063 1070 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 USO1O60763 962 aaKnown RBP13.27□□□□□ -0.29
APTX-227ENST00000485479 BMP15O95972 392 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 TIMP1P01033 207 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 GNAT1P11488 350 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 ME1P48163 572 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 RARRES1P49788 294 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 PTK7Q13308 1070 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 GRB10Q13322 594 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
APTX-227ENST00000485479 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
APTX-227ENST00000485479 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 EFCAB12Q6NXP0 572 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 KSR1Q8IVT5 923 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 PDILTQ8N807 584 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 KRI1Q8N9T8 703 aaKnown RBP13.27□□□□□ -0.29
APTX-227ENST00000485479 RASSF8Q8NHQ8 419 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 TMEM143Q96AN5 459 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 POLR3CQ9BUI4 534 aaPredicted RBP13.27□□□□□ -0.29
APTX-227ENST00000485479 BHMT2Q9H2M3 363 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.29
APTX-227ENST00000485479 SRPRBQ9Y5M8 271 aaKnown RBP13.27□□□□□ -0.29
APTX-227ENST00000485479 A0A087X0B3 334 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 RRN3P2A6NIE6 340 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 CSDE1O75534 798 aaKnown RBP13.26□□□□□ -0.29
APTX-227ENST00000485479 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
APTX-227ENST00000485479 NUCB2P80303 420 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 ZNF484Q5JVG2 852 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 LRRC8DQ7L1W4 858 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 LEO1Q8WVC0 666 aaPredicted RBP13.26□□□□□ -0.29
APTX-227ENST00000485479 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
APTX-227ENST00000485479 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
APTX-227ENST00000485479 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
APTX-227ENST00000485479 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms