RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TRIOO75962 3097 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 NFASCO94856 1347 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 M0QZ92 97 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 STXBP3O00186 592 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 MAFGO15525 162 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 MMP1P03956 469 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 DNAJB1P25685 340 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
NME3-211ENST00000568561 STAT5BP51692 787 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 FUT2Q10981 343 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 PAK2Q13177 524 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 CAMK1Q14012 370 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 RTN1Q16799 776 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 CTC1Q2NKJ3 1217 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 IER5Q5VY09 327 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 AGO4Q9HCK5 861 aaKnown RBP17.72■□□□□ 0.43
NME3-211ENST00000568561 GINS2Q9Y248 185 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 PCDHA2Q9Y5H9 948 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 IGSF9BQ9UPX0 1349 aa17.72■□□□□ 0.43
NME3-211ENST00000568561 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
NME3-211ENST00000568561 PRR33A8MZF0 331 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 DCXO43602 365 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 CCNE2O96020 404 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 ALADP13716 330 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 CEP55Q53EZ4 464 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 NPAS4Q8IUM7 802 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 ADHFE1Q8IWW8 467 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 CRIPAKQ8N1N5 446 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 CELF4Q9BZC1 486 aaKnown RBP17.71■□□□□ 0.43
NME3-211ENST00000568561 TMX1Q9H3N1 280 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 PLAGL2Q9UPG8 496 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 FAM50BQ9Y247 325 aa17.71■□□□□ 0.43
NME3-211ENST00000568561 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
NME3-211ENST00000568561 WDR81Q562E7 1941 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 GOLGA8AA7E2F4 631 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 BACH1O14867 736 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 ZBTB43O43298 467 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 ITGB1P05556 798 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 SCG2P13521 617 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 IRS1P35568 1242 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 ADCK5Q3MIX3 580 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 PPP1R18Q6NYC8 613 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 MTHFD1LQ6UB35 978 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 PLPPR4Q7Z2D5 763 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 ADGRD2Q7Z7M1 963 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 CMTR2Q8IYT2 770 aaKnown RBP17.7■□□□□ 0.42
NME3-211ENST00000568561 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 PPP1R16BQ96T49 567 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 FTHL17Q9BXU8 183 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
NME3-211ENST00000568561 ARIH1Q9Y4X5 557 aaPredicted RBP17.7■□□□□ 0.42
NME3-211ENST00000568561 PCDHGC5Q9Y5F6 944 aa17.7■□□□□ 0.42
NME3-211ENST00000568561 ZNF318Q5VUA4 2279 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 C19orf67A6NJJ6 358 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 MEIS1O00470 390 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 ADAMTS3O15072 1205 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 MBTPS2O43462 519 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 MGEA5O60502 916 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 ZNF76P36508 570 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 KRT76Q01546 638 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 NFX1Q12986 1120 aaKnown RBP17.69■□□□□ 0.42
NME3-211ENST00000568561 SMAD2Q15796 467 aaKnown RBP17.69■□□□□ 0.42
NME3-211ENST00000568561 JAKMIP3Q5VZ66 844 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
NME3-211ENST00000568561 RASEFQ8IZ41 740 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 KLHL23Q8NBE8 558 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 PLVAPQ9BX97 442 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 CDHR5Q9HBB8 845 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 PRKAG3Q9UGI9 489 aa17.69■□□□□ 0.42
NME3-211ENST00000568561 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
NME3-211ENST00000568561 SMIM35A0A1B0GVV1 85 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 NCK2O43639 380 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 FOSP01100 380 aaPredicted RBP17.68■□□□□ 0.42
NME3-211ENST00000568561 RPLP2P05387 115 aaKnown RBP17.68■□□□□ 0.42
NME3-211ENST00000568561 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 KLRC1P26715 233 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 CDC27P30260 824 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 SREBF1P36956 1147 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 NDUFV1P49821 464 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
NME3-211ENST00000568561 RNF20Q5VTR2 975 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 TMEM40Q8WWA1 233 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 P2RX5Q93086 422 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
NME3-211ENST00000568561 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 HCSTQ9UBK5 93 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 CD207Q9UJ71 328 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 LRFN2Q9ULH4 789 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 NOC2LQ9Y3T9 749 aaKnown RBP17.68■□□□□ 0.42
NME3-211ENST00000568561 SQORQ9Y6N5 450 aa17.68■□□□□ 0.42
NME3-211ENST00000568561 IGKV6D-21A0A0A0MT36 114 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 PPFIA3O75145 1194 aa17.67■□□□□ 0.42
NME3-211ENST00000568561 ATG7O95352 703 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms