RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 KIAA0825Q8IV33 1275 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 IFT20Q8IY31 132 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 RIN2Q8WYP3 895 aaPredicted RBP19.21■□□□□ 0.67
SNX2-213ENST00000514949 TRIM34Q9BYJ4 488 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 DBNDD1Q9H9R9 158 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 SMARCAL1Q9NZC9 954 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 EHD2Q9NZN4 543 aa19.21■□□□□ 0.67
SNX2-213ENST00000514949 SCN9AQ15858 1988 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 ENTPD3O75355 529 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 BMP3P12645 472 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 GAP43P17677 238 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 SLC7A5Q01650 507 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 MS4A14Q96JA4 679 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 UIMC1Q96RL1 719 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 TSPYL1Q9H0U9 437 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 ZHX3Q9H4I2 956 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 TMEM59LQ9UK28 342 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 PCDHAC2Q9Y5I4 1007 aa19.2■□□□□ 0.66
SNX2-213ENST00000514949 GOLGA8KD6RF30 607 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 AKAP3O75969 853 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 SLC9A1P19634 815 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNX2-213ENST00000514949 TRAF1Q13077 416 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 ZNF571Q7Z3V5 609 aaPredicted RBP19.19■□□□□ 0.66
SNX2-213ENST00000514949 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 HSD17B14Q9BPX1 270 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNX2-213ENST00000514949 ASTN1O14525 1302 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 IGLV3-22A0A075B6J6 115 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 MEIS1O00470 390 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 EIF3DO15371 548 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNX2-213ENST00000514949 RAD21O60216 631 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 OPA1O60313 960 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 NR3C1P04150 777 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 MYBP10242 640 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 JAM2P57087 298 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 IFI16Q16666 785 aaKnown RBP19.19■□□□□ 0.66
SNX2-213ENST00000514949 MREGQ8N565 214 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 EIF1ADQ8N9N8 165 aaKnown RBP19.19■□□□□ 0.66
SNX2-213ENST00000514949 FAM76AQ8TAV0 307 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 SLC35C1Q96A29 364 aa19.19■□□□□ 0.66
SNX2-213ENST00000514949 EIF2AK1Q9BQI3 630 aaKnown RBP19.19■□□□□ 0.66
SNX2-213ENST00000514949 TRIM37O94972 964 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 PPFIA1Q13136 1202 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.18■□□□□ 0.66
SNX2-213ENST00000514949 ZBTB9Q96C00 473 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 PACSIN1Q9BY11 444 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 TUFT1Q9NNX1 390 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 SIX2Q9NPC8 291 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 NAGPAQ9UK23 515 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 GOLGA6CA6NDK9 693 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 GLI1P08151 1106 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 GOLGA6DP0CG33 693 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 ACTN1P12814 892 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 MUTP22033 750 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 ARID5AQ03989 594 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 GBP6Q6ZN66 633 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 COL23A1Q86Y22 540 aaPredicted RBP19.18■□□□□ 0.66
SNX2-213ENST00000514949 LRRC57Q8N9N7 239 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 AKT1S1Q96B36 256 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 SPAG5Q96R06 1193 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 BHMT2Q9H2M3 363 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 GOLGA6AQ9NYA3 693 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 INTUQ9ULD6 942 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 RABGAP1Q9Y3P9 1069 aa19.18■□□□□ 0.66
SNX2-213ENST00000514949 GFPT2O94808 682 aa19.17■□□□□ 0.66
SNX2-213ENST00000514949 FTCDO95954 541 aa19.17■□□□□ 0.66
SNX2-213ENST00000514949 IRX5P78411 483 aaPredicted RBP19.17■□□□□ 0.66
SNX2-213ENST00000514949 USH1GQ495M9 461 aa19.17■□□□□ 0.66
SNX2-213ENST00000514949 RINT1Q6NUQ1 792 aa19.17■□□□□ 0.66
SNX2-213ENST00000514949 SRLQ86TD4 932 aa19.17■□□□□ 0.66
SNX2-213ENST00000514949 RBM46Q8TBY0 533 aaKnown RBP19.17■□□□□ 0.66
SNX2-213ENST00000514949 A0A0A6YYK5 440 aaPredicted RBP19.16■□□□□ 0.66
SNX2-213ENST00000514949 EML1O00423 815 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 ECE2O60344 883 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 PPFIA4O75335 1185 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 TBCAO75347 108 aaKnown RBP19.16■□□□□ 0.66
SNX2-213ENST00000514949 ZBTB48P10074 688 aaPredicted RBP19.16■□□□□ 0.66
SNX2-213ENST00000514949 SNAP25P60880 206 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 RBM26Q5T8P6 1007 aaKnown RBP19.16■□□□□ 0.66
SNX2-213ENST00000514949 OTOP1Q7RTM1 612 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 KRT27Q7Z3Y8 459 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 IQCKQ8N0W5 287 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 USP38Q8NB14 1042 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 PBKQ96KB5 322 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 MKNK1Q9BUB5 465 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 PRR12Q9ULL5 1215 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 RSPH10B2B2RC85 870 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 TGFB1I1O43294 461 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 FLOT1O75955 427 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 GDF11O95390 407 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 RSPH10BP0C881 870 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 JAG1P78504 1218 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 PAK2Q13177 524 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 C1orf186Q6ZWK4 172 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 SLFN11Q7Z7L1 901 aa19.16■□□□□ 0.66
SNX2-213ENST00000514949 TSEN2Q8NCE0 465 aaKnown RBP19.16■□□□□ 0.66
SNX2-213ENST00000514949 CYP2W1Q8TAV3 490 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms