RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ASPRV1Q53RT3 343 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 ZDHHC15Q96MV8 337 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 KRT86O43790 486 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 PYGLP06737 847 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 ELF3P78545 371 aaPredicted RBP15.31■□□□□ 0.04
LIG1-203ENST00000536218 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 EMBQ6PCB8 327 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 OR8K1Q8NGG5 319 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 GJA10Q969M2 543 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
LIG1-203ENST00000536218 UTRNP46939 3433 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
LIG1-203ENST00000536218 ADCY7P51828 1080 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 VAV2P52735 878 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 SEPT2Q15019 361 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 MIS18BP1Q6P0N0 1132 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 CABP7Q86V35 215 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 CACNA2D3Q8IZS8 1091 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 CNKSR1Q969H4 720 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 NFU1Q9UMS0 254 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 C15orf41Q9Y2V0 281 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 GMNCA6NCL1 334 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 DIAPH2O60879 1101 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 TDP2O95551 362 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
LIG1-203ENST00000536218 SH3BP5LQ7L8J4 393 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 LACRTQ9GZZ8 138 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 STK32BQ9NY57 414 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.3■□□□□ 0.04
LIG1-203ENST00000536218 IGKV6D-41A0A0C4DH26 115 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 FAM153BP0C7A2 387 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 PLCG1P19174 1290 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 TMOD1P28289 359 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 HERVK_113P62684 666 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 FAM153CQ494X1 144 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 LRRC15Q8TF66 581 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 SEC16BQ96JE7 1060 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 ZCWPW1Q9H0M4 648 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 STIM2Q9P246 746 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 FAM153AQ9UHL3 310 aa15.3■□□□□ 0.04
LIG1-203ENST00000536218 MGRN1O60291 552 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 PPP1R11O60927 126 aaPredicted RBP15.29■□□□□ 0.04
LIG1-203ENST00000536218 RAD17O75943 681 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 SLC1A4P43007 532 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 KRT31Q15323 416 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 STYK1Q6J9G0 422 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 SLC30A9Q6PML9 568 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 SPATA4Q8NEY3 305 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 SMCR8Q8TEV9 937 aaPredicted RBP15.29■□□□□ 0.04
LIG1-203ENST00000536218 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
LIG1-203ENST00000536218 CLRN2A0PK11 232 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 GOLGA6L10A6NI86 522 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 NOVP48745 357 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 UBXN1Q04323 297 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 C8orf74Q6P047 294 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 CPLX4Q7Z7G2 160 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 TBC1D1Q86TI0 1168 aaPredicted RBP15.29■□□□□ 0.04
LIG1-203ENST00000536218 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 PAIP2Q9BPZ3 127 aaKnown RBP15.29■□□□□ 0.04
LIG1-203ENST00000536218 PI4KBQ9UBF8 816 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
LIG1-203ENST00000536218 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 TTC36A6NLP5 189 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 MARCH6O60337 910 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 PRCPP42785 496 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 DNA2P51530 1060 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 CYP27A1Q02318 531 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 ATP6V1G3Q96LB4 118 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 PYM1Q9BRP8 204 aaKnown RBP15.28■□□□□ 0.04
LIG1-203ENST00000536218 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 TCP10L2B9ZVM9 353 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 SLC37A4O43826 429 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 RANBP1P43487 201 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 XRCC4Q13426 336 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 RCCD1A6NED2 376 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 ZSCAN5CA6NGD5 496 aaPredicted RBP15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L15C9J2P7 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L13C9JLJ4 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L11C9JVI0 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L18D6R9N7 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L22D6RA61 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L17D6RBQ6 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L19D6RCP7 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L20D6RJB6 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 SMNDC1O75940 238 aaKnown RBP eCLIP15.28■□□□□ 0.041e-10■■■□□ 18.1
LIG1-203ENST00000536218 PRPHP41219 470 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 CARSP49589 748 aaKnown RBP15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L24Q0WX57 530 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 SLFN13Q68D06 897 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 USP17L6PQ6QN14 398 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
LIG1-203ENST00000536218 RPS6KL1Q9Y6S9 549 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms