RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CCDC148Q8NFR7 591 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 TCEAL9Q9UHQ7 104 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 EYSQ5T1H1 3165 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 ADAM17P78536 824 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 MRPS5P82675 430 aaKnown RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 SKIV2LQ15477 1246 aaKnown RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 AAK1Q2M2I8 961 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 FAM26DQ5JW98 314 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 MYOCDQ8IZQ8 938 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 REXO1Q8N1G1 1221 aaKnown RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 TGS1Q96RS0 853 aaKnown RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 SLKQ9H2G2 1235 aaPredicted RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 NID2Q14112 1375 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 DOCK5Q9H7D0 1870 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 PRPF3O43395 683 aaKnown RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 CPA1P15085 419 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 SLC26A2P50443 739 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 IFIH1Q9BYX4 1025 aaKnown RBP23.27■■□□□ 1.32
PTPRU-203ENST00000415600 TRPC6Q9Y210 931 aa23.27■■□□□ 1.32
PTPRU-203ENST00000415600 PRUNE2Q8WUY3 3088 aa23.26■■□□□ 1.31
PTPRU-203ENST00000415600 MEIS1O00470 390 aa23.26■■□□□ 1.31
PTPRU-203ENST00000415600 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
PTPRU-203ENST00000415600 PLPPR4Q7Z2D5 763 aa23.26■■□□□ 1.31
PTPRU-203ENST00000415600 PGBD1Q96JS3 809 aa23.26■■□□□ 1.31
PTPRU-203ENST00000415600 ZMYND12Q9H0C1 365 aa23.26■■□□□ 1.31
PTPRU-203ENST00000415600 AGO4Q9HCK5 861 aaKnown RBP23.26■■□□□ 1.31
PTPRU-203ENST00000415600 M0QZ92 97 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 ACTR2P61160 394 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 SETQ01105 290 aaPredicted RBP23.25■■□□□ 1.31
PTPRU-203ENST00000415600 JAKMIP3Q5VZ66 844 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 FAM160B1Q5W0V3 765 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 FAM117BQ6P1L5 589 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 RNF26Q9BY78 433 aaPredicted RBP23.25■■□□□ 1.31
PTPRU-203ENST00000415600 AGXT2Q9BYV1 514 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 LMCD1Q9NZU5 365 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 TELO2Q9Y4R8 837 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 MTCH2Q9Y6C9 303 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 TTC28Q96AY4 2481 aa23.25■■□□□ 1.31
PTPRU-203ENST00000415600 STAT5BP51692 787 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 TMCO2Q7Z6W1 182 aaPredicted RBP23.24■■□□□ 1.31
PTPRU-203ENST00000415600 PLA2G4DQ86XP0 818 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 TRIM22Q8IYM9 498 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 CYP2W1Q8TAV3 490 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 ASB2Q96Q27 587 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 TMEM260Q9NX78 707 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 CYP46A1Q9Y6A2 500 aa23.24■■□□□ 1.31
PTPRU-203ENST00000415600 MBLAC1A4D2B0 266 aaPredicted RBP23.23■■□□□ 1.31
PTPRU-203ENST00000415600 CYP3A4P08684 503 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 ARP10275 920 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 MCM2P49736 904 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 NEK4P51957 841 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 ERVK-21P61565 698 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 IGBP1P78318 339 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 TCTN1Q2MV58 587 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 IER5Q5VY09 327 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 RUFY3Q7L099 469 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 SAMD11Q96NU1 681 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 YME1L1Q96TA2 773 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 LCHNA4D1U4 455 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 RFXAPO00287 272 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 BACH1O14867 736 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 INSRRP14616 1297 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
PTPRU-203ENST00000415600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.23■■□□□ 1.31
PTPRU-203ENST00000415600 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 TBC1D22BQ9NU19 505 aa23.23■■□□□ 1.31
PTPRU-203ENST00000415600 CHD7Q9P2D1 2997 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 LINC01553A4QN01 128 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 CPLX1O14810 134 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 IFNAR1P17181 557 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 GRB10Q13322 594 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 MIS18BP1Q6P0N0 1132 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 SLC26A6Q9BXS9 759 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 PRDM6Q9NQX0 595 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 COG5Q9UP83 839 aa23.22■■□□□ 1.31
PTPRU-203ENST00000415600 IPO5O00410 1097 aaKnown RBP23.21■■□□□ 1.31
PTPRU-203ENST00000415600 DDIT3P35638 169 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 EVCP57679 992 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 HTRA4P83105 476 aaPredicted RBP23.21■■□□□ 1.31
PTPRU-203ENST00000415600 ITGB3BPQ13352 177 aaPredicted RBP23.21■■□□□ 1.31
PTPRU-203ENST00000415600 RUFY4Q6ZNE9 571 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 FAM43BQ6ZT52 329 aaPredicted RBP23.21■■□□□ 1.31
PTPRU-203ENST00000415600 DNAJB3Q8WWF6 145 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 PHKBQ93100 1093 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 TOP1MTQ969P6 601 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 MTUS1Q9ULD2 1270 aa23.21■■□□□ 1.31
PTPRU-203ENST00000415600 PRRC2BQ5JSZ5 2229 aaKnown RBP23.2■■□□□ 1.31
PTPRU-203ENST00000415600 POTEB3A0JP26 581 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 EPOPA6NHQ4 379 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 CHRNA1P02708 482 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 PDIA3P30101 505 aaKnown RBP23.2■■□□□ 1.3
PTPRU-203ENST00000415600 MRPS6P82932 125 aaKnown RBP23.2■■□□□ 1.3
PTPRU-203ENST00000415600 MKRN4PQ13434 485 aaPredicted RBP23.2■■□□□ 1.3
PTPRU-203ENST00000415600 POTEBQ6S5H4 581 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 ZNF577Q9BSK1 485 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 TM6SF1Q9BZW5 370 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 ZSWIM6Q9HCJ5 1215 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 SH3GLB2Q9NR46 395 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 SQORQ9Y6N5 450 aa23.2■■□□□ 1.3
PTPRU-203ENST00000415600 ARHGEF15O94989 841 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms