RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Phtf1Q9QZ09 761 aa30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 KhsrpQ3U0V1 748 aaKnown RBP30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 Krit1Q6S5J6 736 aa30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 LdhdQ7TNG8 484 aa30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 Snip1Q8BIZ6 383 aaKnown RBP30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 Tdrd1Q99MV1 1172 aa30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 Trp53inp1Q9QXE4 239 aa30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 Tjp3Q9QXY1 905 aa30.58■■■□□ 2.49
Ldb1-208ENSMUST00000185355 Gm15448F6PZL4 682 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Mmp15O54732 657 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Actn4P57780 912 aaKnown RBP30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Skap1Q3UUV5 355 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Senp6Q6P7W0 1132 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Kbtbd13Q8C828 458 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Fam20aQ8CID3 541 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Vmn1r218Q8R261 298 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Slc25a38Q91XD8 326 aa30.57■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Fgfr2P21803 821 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Atp8b1Q148W0 1251 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Fbxo10Q7TQF2 950 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Prpf40aQ9R1C7 953 aaKnown RBP30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Ace3D0G895 737 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Nfxl1E9Q8I7 918 aaKnown RBP30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Wnt10bP48614 389 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 GabpaQ00422 454 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Scarf1Q5ND28 820 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Cacna2d4Q5RJF7 1116 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Sh3gl1Q62419 368 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Ctnna3Q65CL1 895 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Spdl1Q923A2 608 aa30.56■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Gm38392E9Q2A2 434 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Kif3cO35066 796 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Erbb2P70424 1256 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 MmeQ61391 750 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Epha7Q61772 998 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Defb15Q8R2I5 79 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 CbsQ91WT9 561 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Smc1aQ9CU62 1233 aaKnown RBP30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 NkapQ9D0F4 415 aaKnown RBP30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Cabp5Q9JLK3 173 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 JcadQ5DTX6 1320 aa30.55■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Ap1b1O35643 943 aaKnown RBP30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Enc1O35709 589 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Cyp26b1Q811W2 512 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Ccdc73Q8CDM4 1066 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Nr3c2Q8VII8 978 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Asic2Q925H0 512 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Q9D5Q8 446 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 ArP19091 899 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Rit2P70425 217 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Zfp341Q6PGC9 846 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Tmem132dQ76HP3 1097 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Q8C1R3 189 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 ToporslQ9D2F8 683 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Arhgef7Q9ES28 862 aa30.54■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Serpinc1P32261 465 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Gad1P48318 593 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Hoxc13P50207 328 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 PrimpolQ6P1E7 537 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Ppp1r3aQ99MR9 1089 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Tcp1P11983 556 aaKnown RBP30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Stim2P83093 746 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Slc18a1Q8R090 521 aa30.53■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Gm4907B1AXB9 411 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Dnajb6O54946 365 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Bace1P56818 501 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Fgfr4Q03142 799 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Dcaf17Q3TUL7 519 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Mapk6Q61532 720 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Hdac10Q6P3E7 666 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Ptrh1Q8BW00 204 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Trim47Q8C0E3 641 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 SucoQ8C341 1250 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Enox2Q8R0Z2 598 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Tmem132aQ922P8 1018 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Lrrc57Q9D1G5 239 aa30.52■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Parp2O88554 559 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Idh1O88844 414 aaKnown RBP30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Eps15P42567 897 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Gjb6P70689 261 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Dpcr1Q3TNW5 500 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 P4ha1Q60715 534 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Epc1Q8C9X6 813 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Phf20l1Q8CCJ9 1013 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Hsd3b7Q9EQC1 369 aa30.51■■■□□ 2.48
Ldb1-208ENSMUST00000185355 Fam129cD3YZB0 591 aa30.51■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Gfpt1P47856 697 aa30.51■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Ccdc34Q3UI66 367 aa30.51■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Rnf207Q3V3A7 635 aa30.51■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Sp4Q62445 782 aa30.51■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Lrrc1Q80VQ1 524 aa30.51■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Cntnap5cQ0V8T7 1305 aa30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Gm28919A0A087WP35 240 aa30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Nmt1O70310 496 aaKnown RBP30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Pbxip1Q3TVI8 727 aa30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Znf652Q5DU09 608 aa30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Dusp19Q8K4T5 220 aa30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Bzw2Q91VK1 419 aaKnown RBP30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Ndfip2Q91ZP6 311 aa30.5■■■□□ 2.47
Ldb1-208ENSMUST00000185355 Med24Q99K74 987 aa30.5■■■□□ 2.47
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms