RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GH1P01241 217 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 MYL1P05976 194 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
TPM1-209ENST00000558072 PSAPP07602 524 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
TPM1-209ENST00000558072 PFKFB1P16118 471 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 KCNA2P16389 499 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 RPA1P27694 616 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 SEMA3FQ13275 785 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 RRAGBQ5VZM2 374 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 MIS18BP1Q6P0N0 1132 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 DHX37Q8IY37 1157 aaKnown RBP13.92□□□□□ -0.18
TPM1-209ENST00000558072 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
TPM1-209ENST00000558072 VAV3Q9UKW4 847 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 FAM184BQ9ULE4 1060 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 TELO2Q9Y4R8 837 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 SAMM50Q9Y512 469 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 PCDHA10Q9Y5I2 948 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 DHX15O43143 795 aaKnown RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 ADCY3O60266 1144 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 GADD45BO75293 160 aaPredicted RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 ARIH2O95376 493 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
TPM1-209ENST00000558072 CCT6AP40227 531 aaKnown RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 IRX5P78411 483 aaPredicted RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 IL17AQ16552 155 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 HYIQ5T013 277 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 FAM160B1Q5W0V3 765 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 B3GNT9Q6UX72 402 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 SEPT1Q8WYJ6 367 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 COPS5Q92905 334 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 ATP6V0A1Q93050 837 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 KATNBL1Q9H079 304 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 DISC1Q9NRI5 854 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 ZHX1Q9UKY1 873 aaPredicted RBP13.91□□□□□ -0.18
TPM1-209ENST00000558072 PTPN22Q9Y2R2 807 aa13.91□□□□□ -0.18
TPM1-209ENST00000558072 FRMPD3Q5JV73 1810 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 A0A1B0GVL5 298 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 ZNF202O95125 648 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 IGHA2P01877 340 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 HMGCRP04035 888 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 SLFN14P0C7P3 912 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 AKR1A1P14550 325 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 CCND3P30281 292 aaPredicted RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 STAT6P42226 847 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 SLC26A2P50443 739 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 NDUFA8P51970 172 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 SPIRE1Q08AE8 756 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 ITGB3BPQ13352 177 aaPredicted RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 DUSP28Q4G0W2 176 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 CELF3Q5SZQ8 465 aaKnown RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 TAPT1Q6NXT6 567 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 CTU1Q7Z7A3 348 aaKnown RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 FMR1NBQ8N0W7 255 aaPredicted RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 NACC1Q96RE7 527 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 GTPBP4Q9BZE4 634 aaKnown RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 UNC45AQ9H3U1 944 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 AZI2Q9H6S1 392 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 ZSWIM4Q9H7M6 989 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
TPM1-209ENST00000558072 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
TPM1-209ENST00000558072 POTEMA6NI47 508 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 POLR2DO15514 142 aaKnown RBP13.89□□□□□ -0.19
TPM1-209ENST00000558072 MSCO60682 206 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 ATP9AO75110 1047 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 GGPS1O95749 300 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 INHAP05111 366 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
TPM1-209ENST00000558072 ADCYAP1R1P41586 468 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 QARSP47897 775 aaKnown RBP13.89□□□□□ -0.19
TPM1-209ENST00000558072 PSMC5P62195 406 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 TNFAIP2Q03169 654 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 CACNB2Q08289 660 aaPredicted RBP13.89□□□□□ -0.19
TPM1-209ENST00000558072 CCDC183Q5T5S1 534 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 ENGASEQ8NFI3 743 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 CCDC47Q96A33 483 aaKnown RBP13.89□□□□□ -0.19
TPM1-209ENST00000558072 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
TPM1-209ENST00000558072 AP5M1Q9H0R1 490 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 DACT1Q9NYF0 836 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 PPME1Q9Y570 386 aa13.89□□□□□ -0.19
TPM1-209ENST00000558072 DDX39AO00148 427 aaKnown RBP13.88□□□□□ -0.19
TPM1-209ENST00000558072 CHMP2AO43633 222 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 ZEB2O60315 1214 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 KPNA6O60684 536 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms