RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SLC37A4O43826 429 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 F2P00734 622 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 KRT76Q01546 638 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 KIAA0753Q2KHM9 967 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 NFRKBQ6P4R8 1299 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 SLC5A5Q92911 643 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 RIT2Q99578 217 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 C16orf70Q9BSU1 422 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 TEKT3Q9BXF9 490 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 TUT1Q9H6E5 874 aaKnown RBP19.03■□□□□ 0.64
LTBR-215ENST00000546296 AZI2Q9H6S1 392 aa19.03■□□□□ 0.64
LTBR-215ENST00000546296 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
LTBR-215ENST00000546296 ZMYND8Q9ULU4 1186 aaPredicted RBP19.03■□□□□ 0.64
LTBR-215ENST00000546296 NOL7Q9UMY1 257 aaKnown RBP19.03■□□□□ 0.64
LTBR-215ENST00000546296 DNAH12Q6ZR08 3092 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 MYH7BA7E2Y1 1941 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 KIF28PB7ZC32 967 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 BAG4O95429 457 aaKnown RBP19.02■□□□□ 0.64
LTBR-215ENST00000546296 CCNE2O96020 404 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 CLTBP09497 229 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.64
LTBR-215ENST00000546296 ZNF746Q6NUN9 644 aaPredicted RBP19.02■□□□□ 0.64
LTBR-215ENST00000546296 MIS18BP1Q6P0N0 1132 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 TRIM50Q86XT4 487 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 GJA10Q969M2 543 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 TRPV6Q9H1D0 765 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 SMARCAD1Q9H4L7 1026 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 TMEM39AQ9NV64 488 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 SAMM50Q9Y512 469 aa19.02■□□□□ 0.64
LTBR-215ENST00000546296 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
LTBR-215ENST00000546296 H0YGN5 161 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 BACH1O14867 736 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 SYN1P17600 705 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 PTPN11Q06124 597 aaPredicted RBP19.01■□□□□ 0.63
LTBR-215ENST00000546296 FAM126BQ8IXS8 530 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 ETNPPLQ8TBG4 499 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 FAM20AQ96MK3 541 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 NOD1Q9Y239 953 aa19.01■□□□□ 0.63
LTBR-215ENST00000546296 HAS3O00219 553 aa19■□□□□ 0.63
LTBR-215ENST00000546296 CHMP2AO43633 222 aa19■□□□□ 0.63
LTBR-215ENST00000546296 SUPT20HL2P0C7V6 817 aa19■□□□□ 0.63
LTBR-215ENST00000546296 MARK3P27448 753 aa19■□□□□ 0.63
LTBR-215ENST00000546296 MCM7P33993 719 aa19■□□□□ 0.63
LTBR-215ENST00000546296 FAAP100Q0VG06 881 aa19■□□□□ 0.63
LTBR-215ENST00000546296 CALCRLQ16602 461 aa19■□□□□ 0.63
LTBR-215ENST00000546296 FAM160B1Q5W0V3 765 aa19■□□□□ 0.63
LTBR-215ENST00000546296 ABHD15Q6UXT9 468 aa19■□□□□ 0.63
LTBR-215ENST00000546296 POTEDQ86YR6 584 aa19■□□□□ 0.63
LTBR-215ENST00000546296 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
LTBR-215ENST00000546296 TRMT13Q9NUP7 481 aaKnown RBP19■□□□□ 0.63
LTBR-215ENST00000546296 ERAP1Q9NZ08 941 aa19■□□□□ 0.63
LTBR-215ENST00000546296 HDAC6Q9UBN7 1215 aa19■□□□□ 0.63
LTBR-215ENST00000546296 PCDHA10Q9Y5I2 948 aa19■□□□□ 0.63
LTBR-215ENST00000546296 WDR64B1ANS9 1081 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 TBX3O15119 743 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 B4GALT4O60513 344 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 NEMFO60524 1076 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 PSMD10O75832 226 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 ATG7O95352 703 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 PSAPP07602 524 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 TRAPPC10P48553 1259 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 STAT5BP51692 787 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 ZNF174Q15697 407 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 TTC38Q5R3I4 469 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 SWSAP1Q6NVH7 229 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 SH3RF1Q7Z6J0 888 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 SLFN12Q8IYM2 578 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 SPRYD3Q8NCJ5 442 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 UNC45AQ9H3U1 944 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 KCNMB3Q9NPA1 279 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 PDLIM7Q9NR12 457 aa18.99■□□□□ 0.63
LTBR-215ENST00000546296 WNT7AO00755 349 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 LGR5O75473 907 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 CD4P01730 458 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 SMIM10L2AP0DMW4 78 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 SMIM10L2BP0DMW5 78 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 SFNP31947 248 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 JAK3P52333 1124 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 PLPPR4Q7Z2D5 763 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 MIER3Q7Z3K6 550 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 SESTD1Q86VW0 696 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 PCYT2Q99447 389 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 LBHD1Q9BQE6 289 aaPredicted RBP18.98■□□□□ 0.63
LTBR-215ENST00000546296 RNPEPQ9H4A4 650 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 ZNF302Q9NR11 478 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 DISC1Q9NRI5 854 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 GTF2IRD1Q9UHL9 959 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 EMSYQ7Z589 1322 aa18.98■□□□□ 0.63
LTBR-215ENST00000546296 C17orf102A2RUQ5 167 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 TRIM43BA6NCK2 446 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 GNAT1P11488 350 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 RAG1P15918 1043 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 SYT1P21579 422 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 BECN1Q14457 450 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 PTGISQ16647 500 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 GDF6Q6KF10 455 aaPredicted RBP18.97■□□□□ 0.63
LTBR-215ENST00000546296 PDXDC2PQ6P474 469 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 CKAP2LQ8IYA6 745 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 HAS1Q92839 578 aa18.97■□□□□ 0.63
LTBR-215ENST00000546296 TNPO1Q92973 898 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms