RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NLRP14Q86W24 1093 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 MYOCDQ8IZQ8 938 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 GEMIN8Q9NWZ8 242 aaKnown RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 DCDC2CA8MYV0 355 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 LDHBP07195 334 aaKnown RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 PDHBP11177 359 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 SMARCA1P28370 1054 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 NT5C2P49902 561 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 PTK2Q05397 1052 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 QPCTQ16769 361 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 KLHL7Q8IXQ5 586 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 RUFY1Q96T51 708 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 TANGO6Q9C0B7 1094 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 TRAF5O00463 557 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 HOXD13P35453 343 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 ZNF844Q08AG5 666 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 PTPROQ16827 1216 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 WHAMMQ8TF30 809 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 TAF1DQ9H5J8 278 aaPredicted RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 LTBP4Q8N2S1 1624 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 CASP5P51878 434 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 A6NNZ2 444 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 BTNL10A8MVZ5 291 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 E9PMD0 336 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
SMC4-210ENST00000469762 FAM107AO95990 144 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
SMC4-210ENST00000469762 NFIXQ14938 502 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 UBE2SQ16763 222 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 CEP85LQ5SZL2 805 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 HYIQ5T013 277 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 CLEC10AQ8IUN9 316 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 NELFCDQ8IXH7 590 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 NCAPGQ9BPX3 1015 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 ANKRD2Q9GZV1 360 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 SPATA31A1Q5TZJ5 1347 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 ITGA4P13612 1032 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 SLC9A1P19634 815 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 RHBDL3P58872 404 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
SMC4-210ENST00000469762 DDB1Q16531 1140 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
SMC4-210ENST00000469762 BCAS3Q9H6U6 928 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 PANK4Q9NVE7 773 aa11.3□□□□□ -0.6
SMC4-210ENST00000469762 RASSF9O75901 435 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 KIF4AO95239 1232 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 USP11P51784 963 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 RAPGEF1Q13905 1077 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 FAM26FQ5R3K3 315 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 STXBP5LQ9Y2K9 1186 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 HMGB1P1B2RPK0 211 aaPredicted RBP11.29□□□□□ -0.6
SMC4-210ENST00000469762 CES2O00748 559 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 SPTY2D1Q68D10 685 aaPredicted RBP11.29□□□□□ -0.6
SMC4-210ENST00000469762 METTL13Q8N6R0 699 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 AP1M1Q9BXS5 423 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 DNM1LO00429 736 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 KCNK3O14649 394 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 TMOD1P28289 359 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 ACTN3Q08043 901 aaPredicted RBP11.29□□□□□ -0.6
SMC4-210ENST00000469762 DDR1Q08345 913 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 KLHL30Q0D2K2 578 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
SMC4-210ENST00000469762 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 CYFIP2Q96F07 1278 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 NUCKS1Q9H1E3 243 aaKnown RBP11.29□□□□□ -0.6
SMC4-210ENST00000469762 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
SMC4-210ENST00000469762 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 POU5F1Q01860 360 aaKnown RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 CCDC40Q4G0X9 1142 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 OTUD6BQ8N6M0 293 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.28□□□□□ -0.67e-7■■□□□ 12.7
SMC4-210ENST00000469762 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 DDX20Q9UHI6 824 aaKnown RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 BTDP43251 543 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 CCDC13Q8IYE1 715 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 SEC14L1Q92503 715 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 SIX2Q9NPC8 291 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms