RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CTAGE1Q96RT6 745 aa19.86■□□□□ 0.77
CPSF4-209ENST00000465132 FTOQ9C0B1 505 aaKnown RBP eCLIP19.86■□□□□ 0.77
CPSF4-209ENST00000465132 SCN5AQ14524 2016 aa19.85■□□□□ 0.77
CPSF4-209ENST00000465132 MMP1P03956 469 aa19.85■□□□□ 0.77
CPSF4-209ENST00000465132 ARHGEF16Q5VV41 709 aa19.85■□□□□ 0.77
CPSF4-209ENST00000465132 KRT40Q6A162 431 aa19.85■□□□□ 0.77
CPSF4-209ENST00000465132 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
CPSF4-209ENST00000465132 EIF3JO75822 258 aaKnown RBP19.84■□□□□ 0.77
CPSF4-209ENST00000465132 EIF2AK2P19525 551 aaKnown RBP19.84■□□□□ 0.77
CPSF4-209ENST00000465132 GDF6Q6KF10 455 aaPredicted RBP19.84■□□□□ 0.77
CPSF4-209ENST00000465132 KRT25Q7Z3Z0 450 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 HERC6Q8IVU3 1022 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 CCDC155Q8N6L0 562 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 CAGE1Q8TC20 777 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 ADAMTS19Q8TE59 1207 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 AFAP1L1Q8TED9 768 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 NAP1L4Q99733 375 aaKnown RBP19.84■□□□□ 0.77
CPSF4-209ENST00000465132 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
CPSF4-209ENST00000465132 DDX41Q9UJV9 622 aaKnown RBP19.84■□□□□ 0.77
CPSF4-209ENST00000465132 CCDC194A0A1B0GVG4 234 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 MEIS2O14770 477 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 STAM2O75886 525 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 BAIAP3O94812 1187 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 DGKDQ16760 1214 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 FCHSD1Q86WN1 690 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 MICALL1Q8N3F8 863 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 EMID1Q96A84 441 aaPredicted RBP19.83■□□□□ 0.77
CPSF4-209ENST00000465132 TSPYL2Q9H2G4 693 aaPredicted RBP19.83■□□□□ 0.77
CPSF4-209ENST00000465132 FOXP1Q9H334 677 aaPredicted RBP19.83■□□□□ 0.77
CPSF4-209ENST00000465132 PXMP2Q9NR77 195 aa19.83■□□□□ 0.77
CPSF4-209ENST00000465132 CHD7Q9P2D1 2997 aa19.83■□□□□ 0.76
CPSF4-209ENST00000465132 TANC1Q9C0D5 1861 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 RFXAPO00287 272 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 OPLAHO14841 1288 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 NR3C2P08235 984 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 POU3F3P20264 500 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-209ENST00000465132 HOXA13P31271 388 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-209ENST00000465132 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 USP17L6PQ6QN14 398 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 DHX38Q92620 1227 aaKnown RBP19.82■□□□□ 0.76
CPSF4-209ENST00000465132 AIFM3Q96NN9 605 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 CERS4Q9HA82 394 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 MRVI1Q9Y6F6 885 aa19.82■□□□□ 0.76
CPSF4-209ENST00000465132 EPOPA6NHQ4 379 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 KIF28PB7ZC32 967 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 ARHGEF15O94989 841 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 SELPP16109 830 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 CLK2P49760 499 aaKnown RBP19.81■□□□□ 0.76
CPSF4-209ENST00000465132 TAP1Q03518 808 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 RBL2Q08999 1139 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 LAMC2Q13753 1193 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 GPNMBQ14956 572 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 NONOQ15233 471 aaKnown RBP eCLIP19.81■□□□□ 0.76
CPSF4-209ENST00000465132 DIS3L2Q8IYB7 885 aaKnown RBP19.81■□□□□ 0.76
CPSF4-209ENST00000465132 PPTC7Q8NI37 304 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 HDAC6Q9UBN7 1215 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 GTF2IRD1Q9UHL9 959 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 PCDHA6Q9UN73 950 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 KCNJ14Q9UNX9 436 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 PCDHA8Q9Y5H6 950 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
CPSF4-209ENST00000465132 GTPBP6O43824 516 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-209ENST00000465132 CCND2P30279 289 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 KCNJ6P48051 423 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 PSEN2P49810 448 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 LRRC8DQ7L1W4 858 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 C7orf31Q8N865 590 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 UHRF1Q96T88 793 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-209ENST00000465132 KATNAL1Q9BW62 490 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
CPSF4-209ENST00000465132 HAS3O00219 553 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 PARNO95453 639 aaKnown RBP19.79■□□□□ 0.76
CPSF4-209ENST00000465132 F2P00734 622 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 WDR5P61964 334 aaKnown RBP19.79■□□□□ 0.76
CPSF4-209ENST00000465132 MFSD10Q14728 455 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 UBE2SQ16763 222 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 JAKMIP3Q5VZ66 844 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 MCTP1Q6DN14 999 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
CPSF4-209ENST00000465132 ARNTL2Q8WYA1 636 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 PDCD2LQ9BRP1 358 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 ANO3Q9BYT9 981 aa19.79■□□□□ 0.76
CPSF4-209ENST00000465132 NOL7Q9UMY1 257 aaKnown RBP19.79■□□□□ 0.76
CPSF4-209ENST00000465132 KIAA1217Q5T5P2 1943 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 VPS37CA5D8V6 355 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-209ENST00000465132 STX6O43752 255 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 TLL1O43897 1013 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 NBNO60934 754 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 RGS20O76081 388 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 CXCL10P02778 98 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 ZNF286BP0CG31 522 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 CKBP12277 381 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 MYCLP12524 364 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-209ENST00000465132 HOXD8P13378 290 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-209ENST00000465132 SYT1P21579 422 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 USP11P51784 963 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 TFF2Q03403 129 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 SKIV2LQ15477 1246 aaKnown RBP19.78■□□□□ 0.76
CPSF4-209ENST00000465132 KIAA0753Q2KHM9 967 aa19.78■□□□□ 0.76
CPSF4-209ENST00000465132 GNPTABQ3T906 1256 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms