RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC12-209ENST00000441099 CYP3A7-CYP3A51PA0A087WV96 503 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 IPO5O00410 1097 aaKnown RBP18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 LGR5O75473 907 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 ATG7O95352 703 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 CCNE2O96020 404 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 SMIM10L2AP0DMW4 78 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 SMIM10L2BP0DMW5 78 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 CYP3A7P24462 503 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 ACTR2P61160 394 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 PPIGQ13427 754 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■□□□ 12.4
TRAPPC12-209ENST00000441099 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 VWCEQ96DN2 955 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 UIMC1Q96RL1 719 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 LLPHQ9BRT6 129 aaKnown RBP18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 ZNF577Q9BSK1 485 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 BACH2Q9BYV9 841 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 RNPEPQ9H4A4 650 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 ZNF215Q9UL58 517 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 NOD1Q9Y239 953 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 LAMA3Q16787 3333 aa18.1■□□□□ 0.49
TRAPPC12-209ENST00000441099 PITPNM1O00562 1244 aa18.09■□□□□ 0.49
TRAPPC12-209ENST00000441099 SOX1O00570 391 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC12-209ENST00000441099 NONOQ15233 471 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC12-209ENST00000441099 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
TRAPPC12-209ENST00000441099 MBOAT7Q96N66 472 aa18.09■□□□□ 0.49
TRAPPC12-209ENST00000441099 SCN10AQ9Y5Y9 1956 aa18.09■□□□□ 0.49
TRAPPC12-209ENST00000441099 EMSYQ7Z589 1322 aa18.08■□□□□ 0.49
TRAPPC12-209ENST00000441099 C17orf102A2RUQ5 167 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 MSH4O15457 936 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 ST18O60284 1047 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 RBL2Q08999 1139 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 PTK7Q13308 1070 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 BFSP2Q13515 415 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 INF2Q27J81 1249 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 TRIM71Q2Q1W2 868 aaKnown RBP18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 Q4G0T1 1027 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 TMEM240Q5SV17 173 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 ABHD15Q6UXT9 468 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 CAGE1Q8TC20 777 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 TNFRSF25Q93038 417 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 SCLYQ96I15 445 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.08■□□□□ 0.488e-14■□□□□ 9.3
TRAPPC12-209ENST00000441099 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 IL23AQ9NPF7 189 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 TBC1D22BQ9NU19 505 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 SETD4Q9NVD3 440 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 TRIOBPQ9H2D6 2365 aa18.08■□□□□ 0.48
TRAPPC12-209ENST00000441099 IGKV6D-21A0A0A0MT36 114 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 DDX39AO00148 427 aaKnown RBP18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 CD2BP2O95400 341 aaKnown RBP18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 TDP2O95551 362 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 IQCF3P0C7M6 154 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 ACRP10323 421 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 MARK3P27448 753 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 ADAM17P78536 824 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 NR5A1Q13285 461 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 EARS2Q5JPH6 523 aaKnown RBP18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 KRT40Q6A162 431 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 MOXD1Q6UVY6 613 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 GLG1Q92896 1179 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 WNT8BQ93098 351 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 ERAP1Q9NZ08 941 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 KIAA1217Q5T5P2 1943 aa18.07■□□□□ 0.48
TRAPPC12-209ENST00000441099 CCDC194A0A1B0GVG4 234 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 TREHO43280 583 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 MMP1P03956 469 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 KRT2P35908 639 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 PIK3AP1Q6ZUJ8 805 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 PLPPR4Q7Z2D5 763 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 SERINC5Q86VE9 423 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 RETREG2Q8NC44 543 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 SLC5A5Q92911 643 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 ATP6V0A1Q93050 837 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
TRAPPC12-209ENST00000441099 NRCAMQ92823 1304 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 CKBP12277 381 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 STAT5BP51692 787 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 FOSBP53539 338 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 HMGN5P82970 282 aaKnown RBP18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 RASIP1Q5U651 963 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 ZNF746Q6NUN9 644 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 PSRC1Q6PGN9 363 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 CCDC155Q8N6L0 562 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 LMBR1Q8WVP7 490 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 LRCH3Q96II8 777 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 RNPC3Q96LT9 517 aaKnown RBP18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 RIT2Q99578 217 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 BRMS1Q9HCU9 246 aa18.05■□□□□ 0.48
TRAPPC12-209ENST00000441099 FAM205CA6NFA0 338 aa18.04■□□□□ 0.48
TRAPPC12-209ENST00000441099 BTBD18B2RXH4 712 aa18.04■□□□□ 0.48
TRAPPC12-209ENST00000441099 GNAT1P11488 350 aa18.04■□□□□ 0.48
TRAPPC12-209ENST00000441099 SELPP16109 830 aa18.04■□□□□ 0.48
TRAPPC12-209ENST00000441099 RFC2P35250 354 aa18.04■□□□□ 0.48
TRAPPC12-209ENST00000441099 KRT76Q01546 638 aa18.04■□□□□ 0.48
TRAPPC12-209ENST00000441099 PPFIA1Q13136 1202 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms