RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MIIPQ5JXC2 388 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 KCNK18Q7Z418 384 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 CATSPER3Q86XQ3 398 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 ZC3H3Q8IXZ2 948 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 ZNF710Q8N1W2 664 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 PRPF38AQ8NAV1 312 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 ACER1Q8TDN7 264 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 KIAA1683Q9H0B3 1180 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 NDST4Q9H3R1 872 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 VAV3Q9UKW4 847 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 ZNF215Q9UL58 517 aaPredicted RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 COL4A3BPQ9Y5P4 624 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 IGLV3-22A0A075B6J6 115 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 POTEB3A0JP26 581 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 FAM86B1E9PN63 330 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 MED24O75448 989 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 EYA4O95677 639 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 FAM86B2P0C5J1 330 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 BCRP11274 1271 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 PTPN21Q16825 1174 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 POTEBQ6S5H4 581 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 SULF1Q8IWU6 871 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 SPICE1Q8N0Z3 855 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 MNS1Q8NEH6 495 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 SLC5A5Q92911 643 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 FEZ1Q99689 392 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 HAUS4Q9H6D7 363 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 PCDHA2Q9Y5H9 948 aa15.03■□□□□ -0
LIMS1-205ENST00000410093 RASSF10A6NK89 507 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 E9PMD0 336 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 URI1O94763 535 aaPredicted RBP15.02■□□□□ -0
LIMS1-205ENST00000410093 NDUFA10O95299 355 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 SSBP05455 408 aaKnown RBP eCLIP15.02■□□□□ -0
LIMS1-205ENST00000410093 SPATA31C1P0DKV0 1188 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 HSD17B4P51659 736 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 USP14P54578 494 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 CEP55Q53EZ4 464 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 HERC4Q5GLZ8 1057 aaPredicted RBP15.02■□□□□ -0
LIMS1-205ENST00000410093 DCAF15Q66K64 600 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 NCAPH2Q6IBW4 605 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 LRRC55Q6ZSA7 311 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 KIFC2Q96AC6 838 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 RIT2Q99578 217 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 EMILIN3Q9NT22 766 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 SEL1LQ9UBV2 794 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 UBE4BO95155 1302 aa15.02■□□□□ -0
LIMS1-205ENST00000410093 PHF20L1A8MW92 1017 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 EIF3CLB5ME19 914 aaKnown RBP15.02□□□□□ -0.01
LIMS1-205ENST00000410093 COBLO75128 1261 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 CFBP00751 764 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 VEGFBP49765 207 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 ERVK-24P63145 666 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 GRM1Q13255 1194 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 RASA3Q14644 834 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 BMT2Q1RMZ1 405 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 STXBP4Q6ZWJ1 553 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 OTOP1Q7RTM1 612 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 SYN2Q92777 582 aaPredicted RBP15.02□□□□□ -0.01
LIMS1-205ENST00000410093 PCMTD1Q96MG8 357 aaPredicted RBP15.02□□□□□ -0.01
LIMS1-205ENST00000410093 P2RX7Q99572 595 aaKnown RBP15.02□□□□□ -0.01
LIMS1-205ENST00000410093 EIF3CQ99613 913 aaKnown RBP15.02□□□□□ -0.01
LIMS1-205ENST00000410093 SLF1Q9BQI6 1058 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 TSGA10Q9BZW7 698 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 OLFML3Q9NRN5 406 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 TRAF3IP3Q9Y228 551 aa15.02□□□□□ -0.01
LIMS1-205ENST00000410093 CTAGE9A4FU28 777 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 MEIS1O00470 390 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 PDXKO00764 312 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 CETN3O15182 167 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 CALUO43852 315 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-205ENST00000410093 PSMD10O75832 226 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 HSPA1AP0DMV8 641 aaKnown RBP15.01□□□□□ -0.01
LIMS1-205ENST00000410093 HSPA1BP0DMV9 641 aaKnown RBP15.01□□□□□ -0.01
LIMS1-205ENST00000410093 RPL13P26373 211 aaKnown RBP15.01□□□□□ -0.01
LIMS1-205ENST00000410093 GIT2Q14161 759 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 LRCH2Q5VUJ6 765 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 CST9Q5W186 159 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 UBXN4Q92575 508 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 HSD17B14Q9BPX1 270 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 EIF2AK1Q9BQI3 630 aaKnown RBP15.01□□□□□ -0.01
LIMS1-205ENST00000410093 DESI2Q9BSY9 194 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 CCDC94Q9BW85 323 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-205ENST00000410093 GGA3Q9NZ52 723 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 PLAGL2Q9UPG8 496 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 MRFAP1Q9Y605 127 aa15.01□□□□□ -0.01
LIMS1-205ENST00000410093 DOCK1Q14185 1865 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 EIF3DO15371 548 aaKnown RBP eCLIP15□□□□□ -0.01
LIMS1-205ENST00000410093 KRT86O43790 486 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 TBCAO75347 108 aaKnown RBP15□□□□□ -0.01
LIMS1-205ENST00000410093 EGFRP00533 1210 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
LIMS1-205ENST00000410093 SNAP25P60880 206 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 MTF1Q14872 753 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 EPHA7Q15375 998 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 NFIL3Q16649 462 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 NBPF9Q3BBW0 867 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 ARSHQ5FYA8 562 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 KIAA1755Q5JYT7 1200 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms