RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 BAIAP3O94812 1187 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CSTBP04080 98 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 SOD2P04179 222 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 HRGP04196 525 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 RPL17P18621 184 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 KRT15P19012 456 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CD33P20138 364 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 RPS6KB1P23443 525 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 TNFSF4P23510 183 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CD40P25942 277 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 NOP2P46087 812 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 STT3AP46977 705 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 SEPHS1P49903 392 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 SLC5A3P53794 718 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 USP14P54578 494 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 ADKP55263 362 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 RNASE9P60153 205 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 ID3Q02535 119 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 SCRN1Q12765 414 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 KCNAB2Q13303 367 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 SEMA5AQ13591 1074 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PLS1Q14651 629 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 ODF1Q14990 250 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PRSS53Q2L4Q9 553 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 UVSSAQ2YD98 709 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PGS1Q32NB8 556 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 ADCK5Q3MIX3 580 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 HSF5Q4G112 596 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 GLIPR1L2Q4G1C9 344 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 TBC1D10BQ4KMP7 808 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 ANKRD39Q53RE8 183 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PPM1JQ5JR12 505 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 FAM209BQ5JX69 171 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 DGKKQ5KSL6 1271 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 ZNF697Q5TEC3 545 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CCDC30Q5VVM6 783 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 LILRA6Q6PI73 481 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 KCNT2Q6UVM3 1135 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 RSPO2Q6UXX9 243 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 DSTYKQ6XUX3 929 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PDZD4Q76G19 769 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 CYFIP1Q7L576 1253 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 HSCBQ8IWL3 235 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 ARHGEF39Q8N4T4 335 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CISD2Q8N5K1 135 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 PPM1NQ8N819 430 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 TGFBRAP1Q8WUH2 860 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CYB5D2Q8WUJ1 264 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 UCMAQ8WVF2 138 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 HPS3Q969F9 1004 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 TBC1D20Q96BZ9 403 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 MTFMTQ96DP5 389 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 MVB12AQ96EY5 273 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CCDC34Q96HJ3 373 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PAWRQ96IZ0 340 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 MRGPRX3Q96LB0 322 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 UBXN10Q96LJ8 280 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 DPH2Q9BQC3 489 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 FAM167BQ9BTA0 163 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 BOCQ9BWV1 1114 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CELF4Q9BZC1 486 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 ADAM19Q9H013 955 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 QRSL1Q9H0R6 528 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 TMEM60Q9H2L4 133 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 NKX2-4Q9H2Z4 354 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 TRIT1Q9H3H1 467 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 CCDC86Q9H6F5 360 aaKnown RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 SOX17Q9H6I2 414 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 STARD7Q9NQZ5 370 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CCM2LQ9NUG4 571 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 CWC25Q9NXE8 425 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 GPRC5BQ9NZH0 403 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 ARHGAP28Q9P2N2 729 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 TJP2Q9UDY2 1190 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 SUSD2Q9UGT4 822 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PADI4Q9UM07 663 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 HIF3AQ9Y2N7 669 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PTPN22Q9Y2R2 807 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 CRYL1Q9Y2S2 319 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 SLC45A1Q9Y2W3 748 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 PCDHA11Q9Y5I1 949 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 MAGED1Q9Y5V3 778 aaPredicted RBP2.37□□□□□ -2.03
RTF1-207ENST00000561076 GPR45Q9Y5Y3 372 aa2.37□□□□□ -2.03
RTF1-207ENST00000561076 A0A087WV62 115 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ST20-MTHFSA0A0A6YYL1 179 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SSU72P8A0A1W2PR75 194 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 FSD2A1L4K1 749 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 A6NCN8 305 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SYNDIG1LA6NDD5 238 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 POM121BA6NF01 834 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SMTNL1A8MU46 457 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 H3BML4 177 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 TRAF5O00463 557 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 MEIS1O00470 390 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SOX1O00570 391 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 CLGNO14967 610 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 FFAR2O15552 330 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ST18O60284 1047 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 MAN1A2O60476 641 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 DNAJA2O60884 412 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms