RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NEK8Q86SG6 692 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 SPATA33Q96N06 139 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 MBOAT7Q96N66 472 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 UIMC1Q96RL1 719 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 FOXP1Q9H334 677 aaPredicted RBP17.15■□□□□ 0.34
CD9-210ENST00000543916 MLXIPQ9HAP2 919 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 DNAH12Q6ZR08 3092 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 WNT7AO00755 349 aa17.14■□□□□ 0.33
CD9-210ENST00000543916 ZEB2O60315 1214 aa17.14■□□□□ 0.33
CD9-210ENST00000543916 MYL3P08590 195 aa17.14■□□□□ 0.33
CD9-210ENST00000543916 PURAQ00577 322 aaKnown RBP17.14■□□□□ 0.33
CD9-210ENST00000543916 MOXD1Q6UVY6 613 aa17.14■□□□□ 0.33
CD9-210ENST00000543916 GIMAP8Q8ND71 665 aaPredicted RBP17.14■□□□□ 0.33
CD9-210ENST00000543916 POLR3EQ9NVU0 708 aa17.14■□□□□ 0.33
CD9-210ENST00000543916 NFASCO94856 1347 aa17.14■□□□□ 0.33
CD9-210ENST00000543916 SLC37A4O43826 429 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 HOXD8P13378 290 aaPredicted RBP17.13■□□□□ 0.33
CD9-210ENST00000543916 U2AF2P26368 475 aaKnown RBP eCLIP17.13■□□□□ 0.33
CD9-210ENST00000543916 ATN1P54259 1190 aaPredicted RBP17.13■□□□□ 0.33
CD9-210ENST00000543916 SP4Q02446 784 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 LRRC26Q2I0M4 334 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 Q4G0T1 1027 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
CD9-210ENST00000543916 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
CD9-210ENST00000543916 GPR20Q99678 358 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 ZNF577Q9BSK1 485 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
CD9-210ENST00000543916 H3BQV1 296 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 IPO5O00410 1097 aaKnown RBP17.12■□□□□ 0.33
CD9-210ENST00000543916 MSH4O15457 936 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 DHX15O43143 795 aaKnown RBP17.12■□□□□ 0.33
CD9-210ENST00000543916 CCNT1O60563 726 aaKnown RBP17.12■□□□□ 0.33
CD9-210ENST00000543916 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 PSMC6P62333 389 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
CD9-210ENST00000543916 DGKDQ16760 1214 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 SLC39A5Q6ZMH5 540 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 SDF4Q9BRK5 362 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
CD9-210ENST00000543916 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
CD9-210ENST00000543916 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
CD9-210ENST00000543916 DDX39AO00148 427 aaKnown RBP17.11■□□□□ 0.33
CD9-210ENST00000543916 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
CD9-210ENST00000543916 KPNA6O60684 536 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 CABYRO75952 493 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 GCFC2P16383 781 aaKnown RBP17.11■□□□□ 0.33
CD9-210ENST00000543916 SNX17Q15036 470 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 ETNPPLQ8TBG4 499 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 KAT2BQ92831 832 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 GJA10Q969M2 543 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 MTG1Q9BT17 334 aaPredicted RBP17.11■□□□□ 0.33
CD9-210ENST00000543916 HTATIP2Q9BUP3 242 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 GRIN2DO15399 1336 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 ELP1O95163 1332 aa17.11■□□□□ 0.33
CD9-210ENST00000543916 WDR81Q562E7 1941 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 CCNE2O96020 404 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
CD9-210ENST00000543916 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 PPP1R13LQ8WUF5 828 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
CD9-210ENST00000543916 NAP1L4Q99733 375 aaKnown RBP17.1■□□□□ 0.33
CD9-210ENST00000543916 A0A0U1RQG5 324 aaPredicted RBP17.09■□□□□ 0.33
CD9-210ENST00000543916 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
CD9-210ENST00000543916 F2P00734 622 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 LGALS2P05162 132 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 ATP2B1P20020 1258 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 PDCP20941 246 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 SYT1P21579 422 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
CD9-210ENST00000543916 RTP1P59025 263 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 ACTR2P61160 394 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 TRIM60Q495X7 471 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 C1orf53Q5VUE5 145 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 TRIM50Q86XT4 487 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 SLC43A3Q8NBI5 491 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 TBC1D22BQ9NU19 505 aa17.09■□□□□ 0.33
CD9-210ENST00000543916 PSMD10O75832 226 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
CD9-210ENST00000543916 CDK7P50613 346 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 NBR1Q14596 966 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
CD9-210ENST00000543916 LRCH2Q5VUJ6 765 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 RIT2Q99578 217 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 ATP11BQ9Y2G3 1177 aa17.08■□□□□ 0.32
CD9-210ENST00000543916 MYH15Q9Y2K3 1946 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms