RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 NEK11Q8NG66 645 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 ZNF384Q8TF68 577 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 NSUN4Q96CB9 384 aaKnown RBP8.78□□□□□ -1
SPIDR-223ENST00000524033 DESI2Q9BSY9 194 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 RNF26Q9BY78 433 aaPredicted RBP8.78□□□□□ -1
SPIDR-223ENST00000524033 ARHGAP39Q9C0H5 1083 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 CSRNP2Q9H175 543 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 ARFGAP3Q9NP61 516 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 LIMA1Q9UHB6 759 aaKnown RBP8.78□□□□□ -1
SPIDR-223ENST00000524033 CPA4Q9UI42 421 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 ANAPC4Q9UJX5 808 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 KCNJ14Q9UNX9 436 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 AFG3L2Q9Y4W6 797 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 SLC12A7Q9Y666 1083 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 PTCH2Q9Y6C5 1203 aa8.78□□□□□ -1
SPIDR-223ENST00000524033 A0A0U1RQJ8 604 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 IDH1O75874 414 aaKnown RBP8.77□□□□□ -1.01
SPIDR-223ENST00000524033 BMP15O95972 392 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-223ENST00000524033 GYPCP04921 128 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 SLURP2P0DP57 97 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 GNAT2P19087 354 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 PSMC4P43686 418 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 PRMT2P55345 433 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 CHMP4BP1P59074 171 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 NR5A1Q13285 461 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 WTAPQ15007 396 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 PPP2R5BQ15173 497 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 NPY5RQ15761 445 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 WHAMMP3Q1A5X7 153 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 SLC4A8Q2Y0W8 1093 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 MSS51Q4VC12 460 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 GPAT2Q6NUI2 795 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 TRIM22Q8IYM9 498 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 ZNF654Q8IZM8 581 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 CCDC12Q8WUD4 166 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-223ENST00000524033 ATRIPQ8WXE1 791 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 ZNF333Q96JL9 665 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 PHF20Q9BVI0 1012 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 TSPYL1Q9H0U9 437 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 NAPBQ9H115 298 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.77□□□□□ -1.01
SPIDR-223ENST00000524033 INCENPQ9NQS7 918 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 MYO1AQ9UBC5 1043 aa8.77□□□□□ -1.01
SPIDR-223ENST00000524033 ATRNL1Q5VV63 1379 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 A0A0G2JLL6 359 aaPredicted RBP8.76□□□□□ -1.01
SPIDR-223ENST00000524033 CCDC196A0A1B0GTZ2 297 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 LRRC10BA6NIK2 292 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 TRIM75PA6NK02 468 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 WNT7AO00755 349 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 POLR3GO15318 223 aaPredicted RBP8.76□□□□□ -1.01
SPIDR-223ENST00000524033 BAG3O95817 575 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 CYP2C8P10632 490 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 HOXD10P28358 340 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 ERVK-24P63145 666 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 RBL2Q08999 1139 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 RAD51AP2Q09MP3 1159 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 TRIM14Q14142 442 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PTPRNQ16849 979 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 GADL1Q6ZQY3 521 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 ZNF662Q6ZS27 426 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PRRT2Q7Z6L0 340 aaPredicted RBP8.76□□□□□ -1.01
SPIDR-223ENST00000524033 TEX11Q8IYF3 940 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 TMTC2Q8N394 836 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PDILTQ8N807 584 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 IGSF22Q8N9C0 903 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 SH3TC2Q8TF17 1288 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 FERMT2Q96AC1 680 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PAGE5Q96GU1 130 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 GSDMAQ96QA5 445 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 CTAGE1Q96RT6 745 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PNKPQ96T60 521 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PARK7Q99497 189 aaKnown RBP8.76□□□□□ -1.01
SPIDR-223ENST00000524033 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 ARMT1Q9H993 441 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PRDM9Q9NQV7 894 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 L1RE1Q9UN81 338 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 CNTNAP5Q8WYK1 1306 aa8.76□□□□□ -1.01
SPIDR-223ENST00000524033 PRPF3O43395 683 aaKnown RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 FGRP09769 529 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 CCNYL3P0C7X3 344 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 FXR1P51114 621 aaKnown RBP eCLIP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 ATP2C1P98194 919 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 MAP3K12Q12852 859 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 EARS2Q5JPH6 523 aaKnown RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 TJAP1Q5JTD0 557 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 CNGA4Q8IV77 575 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 SPNS2Q8IVW8 549 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 SLC35F6Q8N357 371 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 LCORLQ8N3X6 602 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 FAM160A2Q8N612 972 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 MAGEB6Q8N7X4 407 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 FANCBQ8NB91 859 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 GOLGA5Q8TBA6 731 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 RAET1EQ8TD07 263 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 SH3RF3Q8TEJ3 882 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 NAPGQ99747 312 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms