RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 IGFBP4P22692 258 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
NUP50-217ENST00000491860 IKBKEQ14164 716 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 NECTIN1Q15223 517 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 CCDC85BQ15834 202 aaPredicted RBP10.07□□□□□ -0.8
NUP50-217ENST00000491860 HSDL1Q3SXM5 330 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 SGMS1Q86VZ5 419 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 HERC6Q8IVU3 1022 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 ZNF713Q8N859 430 aaPredicted RBP10.07□□□□□ -0.8
NUP50-217ENST00000491860 GPRASP2Q96D09 838 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 VWCEQ96DN2 955 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 ZBED2Q9BTP6 218 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 TUT1Q9H6E5 874 aaKnown RBP10.07□□□□□ -0.8
NUP50-217ENST00000491860 PSTPIP2Q9H939 334 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 RBM28Q9NW13 759 aaKnown RBP10.07□□□□□ -0.8
NUP50-217ENST00000491860 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 SPDYE3A6NKU9 549 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 TLL1O43897 1013 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 LGALS2P05162 132 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 RABGGTBP53611 331 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 RCAN1P53805 252 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 WDR5P61964 334 aaKnown RBP10.06□□□□□ -0.8
NUP50-217ENST00000491860 SERINC5Q86VE9 423 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 IL31RAQ8NI17 732 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 ATP6V0A1Q93050 837 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 CTAGE1Q96RT6 745 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 C16orf70Q9BSU1 422 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 LMCD1Q9NZU5 365 aa10.06□□□□□ -0.8
NUP50-217ENST00000491860 TCF20Q9UGU0 1960 aaKnown RBP10.06□□□□□ -0.8
NUP50-217ENST00000491860 RSPH10B2B2RC85 870 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 MEIS2O14770 477 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 LGR5O75473 907 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 FOSP01100 380 aaPredicted RBP10.05□□□□□ -0.8
NUP50-217ENST00000491860 CA3P07451 260 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 RSPH10BP0C881 870 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 HOXC8P31273 242 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 MRPS9P82933 396 aaKnown RBP10.05□□□□□ -0.8
NUP50-217ENST00000491860 SP2Q02086 613 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 SLC35G1Q2M3R5 365 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 PPP1R18Q6NYC8 613 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
NUP50-217ENST00000491860 CYFIP1Q7L576 1253 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 FANCBQ8NB91 859 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 DHX38Q92620 1227 aaKnown RBP10.05□□□□□ -0.8
NUP50-217ENST00000491860 APBB2Q92870 758 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 NECAB3Q96P71 396 aaPredicted RBP10.05□□□□□ -0.8
NUP50-217ENST00000491860 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 RAD9AQ99638 391 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 GPR20Q99678 358 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 LRFN3Q9BTN0 628 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 COG5Q9UP83 839 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 HCN4Q9Y3Q4 1203 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 TAF6LQ9Y6J9 622 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 NRCAMQ92823 1304 aa10.05□□□□□ -0.8
NUP50-217ENST00000491860 CCDC196A0A1B0GTZ2 297 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 NBNO60934 754 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 CDC45O75419 566 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 GJB5O95377 273 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 AMHP03971 560 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 SMIM10L2AP0DMW4 78 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 SMIM10L2BP0DMW5 78 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 THPOP40225 353 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
NUP50-217ENST00000491860 ZNF618Q5T7W0 954 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 MCTP2Q6DN12 878 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 TAF2Q6P1X5 1199 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 DHX32Q7L7V1 743 aaKnown RBP10.04□□□□□ -0.8
NUP50-217ENST00000491860 RSPH3Q86UC2 560 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 SRBD1Q8N5C6 995 aaKnown RBP10.04□□□□□ -0.8
NUP50-217ENST00000491860 SEPT8Q92599 483 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 SAMD11Q96NU1 681 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 MYL10Q9BUA6 226 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 INSL6Q9Y581 213 aa10.04□□□□□ -0.8
NUP50-217ENST00000491860 ZBTB43O43298 467 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 GPR37L1O60883 481 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 PLEKHA8P1O95397 391 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 MYOGP15173 224 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 KCNQ1P51787 676 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 TFF2Q03403 129 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 TAP1Q03518 808 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 MTMR1Q13613 665 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 PLEKHG4Q58EX7 1191 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 MICAL3Q7RTP6 2002 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 HEATR3Q7Z4Q2 680 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 RPAINQ86UA6 219 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 CCDC12Q8WUD4 166 aaPredicted RBP10.03□□□□□ -0.8
NUP50-217ENST00000491860 PPP1R13LQ8WUF5 828 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 SEPT1Q8WYJ6 367 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 TGS1Q96RS0 853 aaKnown RBP10.03□□□□□ -0.8
NUP50-217ENST00000491860 RNPEPQ9H4A4 650 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 SMARCAD1Q9H4L7 1026 aa10.03□□□□□ -0.8
NUP50-217ENST00000491860 ERAP1Q9NZ08 941 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms