RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 COL20A1Q9P218 1284 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 SLC26A4O43511 780 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 TPM3P06753 285 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 TXKP42681 527 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 MYL5Q02045 173 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 GRB14Q14449 540 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 NCAPHQ15003 741 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 RASSF8Q8NHQ8 419 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 CD99L2Q8TCZ2 262 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 MRFAP1L1Q96HT8 127 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 PURBQ96QR8 312 aaKnown RBP21.65■■□□□ 1.06
LMNB1-202ENST00000395354 DNAJC25-GNG10A0A024R161 153 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 PP2D1A8MPX8 630 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 GOLGA6L6A8MZA4 724 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 CDC25AP30304 524 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 ARHGAP4P98171 946 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 CNTN2Q02246 1040 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 NAALADL2Q58DX5 795 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 MORN1Q5T089 497 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 ZSCAN30Q86W11 494 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 CALML4Q96GE6 196 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 TAAR1Q96RJ0 339 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 RMND1Q9NWS8 449 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 LRWD1Q9UFC0 647 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 GJD2Q9UKL4 321 aa21.65■■□□□ 1.06
LMNB1-202ENST00000395354 MGAMO43451 1857 aa21.64■■□□□ 1.06
LMNB1-202ENST00000395354 MYH7BA7E2Y1 1941 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 ESPNB1AK53 854 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 TBX3O15119 743 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 COBLO75128 1261 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 CYP3A4P08684 503 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 ERCC5P28715 1186 aaPredicted RBP21.64■■□□□ 1.05
LMNB1-202ENST00000395354 CIITAP33076 1130 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 CAP1Q01518 475 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 Q4G0T1 1027 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 FAM133AQ8N9E0 248 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 RMDN3Q96TC7 470 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 MTRQ99707 1265 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 NUDT12Q9BQG2 462 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 KBTBD4Q9NVX7 518 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 PLXNB2O15031 1838 aa21.64■■□□□ 1.05
LMNB1-202ENST00000395354 MAP2K5Q13163 448 aa21.63■■□□□ 1.05
LMNB1-202ENST00000395354 SLFN12Q8IYM2 578 aa21.63■■□□□ 1.05
LMNB1-202ENST00000395354 HAS1Q92839 578 aa21.63■■□□□ 1.05
LMNB1-202ENST00000395354 EHMT1Q9H9B1 1298 aa21.63■■□□□ 1.05
LMNB1-202ENST00000395354 KCNMB3Q9NPA1 279 aa21.63■■□□□ 1.05
LMNB1-202ENST00000395354 RBBP6Q7Z6E9 1792 aaKnown RBP21.63■■□□□ 1.05
LMNB1-202ENST00000395354 ARHGEF6Q15052 776 aa21.62■■□□□ 1.05
LMNB1-202ENST00000395354 ENOX1Q8TC92 643 aaKnown RBP21.62■■□□□ 1.05
LMNB1-202ENST00000395354 MMTAG2Q9BU76 263 aaKnown RBP21.62■■□□□ 1.05
LMNB1-202ENST00000395354 TTC12Q9H892 705 aaPredicted RBP21.62■■□□□ 1.05
LMNB1-202ENST00000395354 SLC5A4Q9NY91 659 aa21.62■■□□□ 1.05
LMNB1-202ENST00000395354 STK17AQ9UEE5 414 aa21.62■■□□□ 1.05
LMNB1-202ENST00000395354 ADD3Q9UEY8 706 aaKnown RBP21.62■■□□□ 1.05
LMNB1-202ENST00000395354 SOWAHBA6NEL2 793 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 MARCH6O60337 910 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 HSPA1AP0DMV8 641 aaKnown RBP21.61■■□□□ 1.05
LMNB1-202ENST00000395354 HSPA1BP0DMV9 641 aaKnown RBP21.61■■□□□ 1.05
LMNB1-202ENST00000395354 PLCG1P19174 1290 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 HOXD10P28358 340 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 ZNF792Q3KQV3 632 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 ARHGEF16Q5VV41 709 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 DNERQ8NFT8 737 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 NSUN6Q8TEA1 469 aaKnown RBP21.61■■□□□ 1.05
LMNB1-202ENST00000395354 SOCS4Q8WXH5 440 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 USP6NLQ92738 828 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 GTPBP4Q9BZE4 634 aaKnown RBP21.61■■□□□ 1.05
LMNB1-202ENST00000395354 PCDHA12Q9UN75 941 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 ZSWIM8A7E2V4 1837 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 GNRH1P01148 92 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 RGS2P41220 211 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 AMPD3Q01432 767 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 KCNB1Q14721 858 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 KRT79Q5XKE5 535 aa21.61■■□□□ 1.05
LMNB1-202ENST00000395354 RPN1P04843 607 aaKnown RBP21.6■■□□□ 1.05
LMNB1-202ENST00000395354 EIF2AK2P19525 551 aaKnown RBP21.6■■□□□ 1.05
LMNB1-202ENST00000395354 CYP2B6P20813 491 aa21.6■■□□□ 1.05
LMNB1-202ENST00000395354 CUL4BQ13620 913 aa21.6■■□□□ 1.05
LMNB1-202ENST00000395354 FAM20AQ96MK3 541 aa21.6■■□□□ 1.05
LMNB1-202ENST00000395354 PXMP2Q9NR77 195 aa21.6■■□□□ 1.05
LMNB1-202ENST00000395354 GABRQQ9UN88 632 aa21.6■■□□□ 1.05
LMNB1-202ENST00000395354 DIS3Q9Y2L1 958 aaKnown RBP21.6■■□□□ 1.05
LMNB1-202ENST00000395354 STK24Q9Y6E0 443 aa21.6■■□□□ 1.05
LMNB1-202ENST00000395354 HOXC6P09630 235 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 HSPA8P11142 646 aaKnown RBP21.59■■□□□ 1.05
LMNB1-202ENST00000395354 FLT3LGP49771 235 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 UBXN2AP68543 259 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 PRKCZQ05513 592 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 NPLOC4Q8TAT6 608 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 FGD4Q96M96 766 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 BLZF1Q9H2G9 400 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 SRRDQ9UH36 339 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 ZKSCAN5Q9Y2L8 839 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 ASTN1O14525 1302 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 RPTORQ8N122 1335 aa21.59■■□□□ 1.05
LMNB1-202ENST00000395354 CASP1P29466 404 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 CTCFP49711 727 aaPredicted RBP21.58■■□□□ 1.05
LMNB1-202ENST00000395354 ALDH5A1P51649 535 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms