RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 NUBP1P53384 320 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 MRPS9P82933 396 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 SART3Q15020 963 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 PTPROQ16827 1216 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 CTC1Q2NKJ3 1217 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 SEPT8Q92599 483 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 LY9Q9HBG7 655 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 MYH9P35579 1960 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 PAPLNO95428 1278 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 CYP21A2P08686 494 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 ANTXR2P58335 489 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 HIC1Q14526 733 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 KIAA0753Q2KHM9 967 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 PLPPR4Q7Z2D5 763 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 NLRX1Q86UT6 975 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 CMTR2Q8IYT2 770 aaKnown RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 NME8Q8N427 588 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 TNPO1Q92973 898 aaKnown RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 LNPKQ9C0E8 428 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZNF215Q9UL58 517 aaPredicted RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 PCDHA1Q9Y5I3 950 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 E7EWF7 191 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 MEIS2O14770 477 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 SMIM10L2AP0DMW4 78 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 SMIM10L2BP0DMW5 78 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 KCNA2P16389 499 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 SP2Q02086 613 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 RRP12Q5JTH9 1297 aaKnown RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 STK11IPQ8N1F8 1099 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 STAG2Q8N3U4 1231 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 ESYT2A0FGR8 921 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 TRIM6-TRIM34B2RNG4 842 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 SH2B2O14492 632 aaPredicted RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 MYCNP04198 464 aaPredicted RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 HOXD11P31277 338 aaPredicted RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 CLK2P49760 499 aaKnown RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 RABGGTBP53611 331 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 CRYGNQ8WXF5 182 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 TBC1D5Q92609 795 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 PABPC5Q96DU9 382 aaKnown RBP7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 FTHL17Q9BXU8 183 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 UBA5Q9GZZ9 404 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 FAM50BQ9Y247 325 aa7.2□□□□□ -1.26
SMARCAD1-203ENST00000394961 ARHGEF15O94989 841 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 CYP3A4P08684 503 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 HAND2P61296 217 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 UBE3AQ05086 875 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 TRDNQ13061 729 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 WTAPQ15007 396 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 PDE12Q6L8Q7 609 aaKnown RBP7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 JADE2Q9NQC1 790 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 CEP290O15078 2479 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 POTEB3A0JP26 581 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 PRR33A8MZF0 331 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 RSPH10B2B2RC85 870 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 H3BRB1 525 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 GGPS1O95749 300 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 MMP1P03956 469 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 RSPH10BP0C881 870 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 PKN1Q16512 942 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 ODR4Q5SWX8 454 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 POTEBQ6S5H4 581 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 CWC27Q6UX04 472 aaKnown RBP7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 EEPD1Q7L9B9 569 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 BMP8AQ7Z5Y6 402 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 CATIPQ7Z7H3 387 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 WNT8BQ93098 351 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 RILPL2Q969X0 211 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 SPATA33Q96N06 139 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZMYM2Q9UBW7 1377 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 GRXCR2A6NFK2 248 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 FOSP01100 380 aaPredicted RBP7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 AP3B2Q13367 1082 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 USH1GQ495M9 461 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 SEPT14Q6ZU15 432 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 LSG1Q9H089 658 aaKnown RBP7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 SUGCTQ9HAC7 445 aa7.19□□□□□ -1.26
SMARCAD1-203ENST00000394961 ERICH2A1L162 156 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 GOLGA8HP0CJ92 632 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 DEFB103AP81534 67 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 CBX2Q14781 532 aaPredicted RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 NECTIN1Q15223 517 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 HSDL1Q3SXM5 330 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 TMEM184AQ6ZMB5 413 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 IL31RAQ8NI17 732 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 RRP36Q96EU6 259 aaKnown RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 IL25Q9H293 177 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 ELAC1Q9H777 363 aaKnown RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 UBE2ZQ9H832 354 aaPredicted RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 PCDHA2Q9Y5H9 948 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 C1RP00736 705 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 MYOGP15173 224 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 EIF2AK2P19525 551 aaKnown RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 PTGS1P23219 599 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms