RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 LINC00205P59089 165 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 NKX3-2P78367 333 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 LAMB3Q13751 1172 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 USP10Q14694 798 aaKnown RBP0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 TIGD2Q4W5G0 525 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 DTHD1Q6ZMT9 781 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 ZNF788Q6ZQV5 615 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 Q6ZRM9 215 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 BRAPQ7Z569 592 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 ZNF329Q86UD4 541 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 CXorf67Q86X51 503 aaPredicted RBP0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 PHACTR4Q8IZ21 702 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 LCORLQ8N3X6 602 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 MSL2Q9HCI7 577 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 GOPCQ9HD26 462 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 ALG13Q9NP73 1137 aaKnown RBP0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 SYBUQ9NX95 663 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 SAMM50Q9Y512 469 aa0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 COL4A4P53420 1690 aaPredicted RBP0.55□□□□□ -2.32
TRAJ42-201ENST00000390495 WIPF3A6NGB9 483 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 MATN2O00339 956 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 SNRPB2P08579 225 aaKnown RBP0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 STAT5AP42229 794 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 LRRC14Q15048 493 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 CR1LQ2VPA4 569 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 RABL3Q5HYI8 236 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 ZNF626Q68DY1 528 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 PI16Q6UXB8 463 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 CAPN12Q6ZSI9 719 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 REXO1L1PQ8IX06 675 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 ANKRD35Q8N283 1001 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 PRIMPOLQ96LW4 560 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 KIAA1683Q9H0B3 1180 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 GDPD2Q9HCC8 539 aa0.54□□□□□ -2.32
TRAJ42-201ENST00000390495 GTPBP1O00178 669 aaKnown RBP0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 LINC01565O15544 149 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 PLGP00747 810 aaPredicted RBP0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 ZNF888P0CJ79 500 aaPredicted RBP0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 MAN2A2P49641 1150 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 FOXI1Q12951 378 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 PLEKHG4Q58EX7 1191 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 PTF1AQ7RTS3 328 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 FAM126BQ8IXS8 530 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 CCDC74AQ96AQ1 378 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 HMCESQ96FZ2 354 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 COQ10AQ96MF6 247 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 MKNK1Q9BUB5 465 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 TRPS1Q9UHF7 1281 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 POLIQ9UNA4 740 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 TRAK1Q9UPV9 953 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 SIT1Q9Y3P8 196 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 NR2E1Q9Y466 385 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 SMAD5-AS1Q9Y6J3 95 aa0.53□□□□□ -2.32
TRAJ42-201ENST00000390495 CLASP2O75122 1294 aaKnown RBP0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 VAV1P15498 845 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 HNRNPA3P51991 378 aaKnown RBP0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 PROK1P58294 105 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 SEMA3AQ14563 771 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 NOLC1Q14978 699 aaKnown RBP eCLIP0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 CCDC62Q6P9F0 684 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 CYP2R1Q6VVX0 501 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 CMTR2Q8IYT2 770 aaKnown RBP0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 LZTR1Q8N653 840 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 LINC00476Q8WZB0 136 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 TMEM209Q96SK2 561 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 KATNBL1Q9H079 304 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 BHMT2Q9H2M3 363 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 NELFAQ9H3P2 528 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 SERHL2Q9H4I8 314 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 MINPP1Q9UNW1 487 aa0.52□□□□□ -2.33
TRAJ42-201ENST00000390495 CENPVL1A0A0U1RR11 272 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 IFITM10A6NMD0 228 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L15C9J2P7 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L10C9JJH3 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L13C9JLJ4 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L12C9JPN9 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L11C9JVI0 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L21D6R901 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L18D6R9N7 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L22D6RA61 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L17D6RBQ6 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L19D6RCP7 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L20D6RJB6 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 SERPINB2P05120 415 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 TGFB3P10600 412 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 L1CAMP32004 1257 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 NR4A2P43354 598 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 SLC6A11P48066 632 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 CDK8P49336 464 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 PTPN11Q06124 597 aaPredicted RBP0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 USP17L24Q0WX57 530 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 RTP2Q5QGT7 225 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 WWC2Q6AWC2 1192 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 PDZRN4Q6ZMN7 1036 aaPredicted RBP0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 FNBP4Q8N3X1 1017 aaPredicted RBP0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 LILRA3Q8N6C8 439 aaPredicted RBP0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 DENND1AQ8TEH3 1009 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 NSMCE1Q8WV22 266 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 SLC9A6Q92581 669 aa0.51□□□□□ -2.33
TRAJ42-201ENST00000390495 ACSF2Q96CM8 615 aaPredicted RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms