RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TRPC1P48995 793 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 MRPS15P82914 257 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SKOR1P84550 965 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 BLZF1Q9H2G9 400 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SLC38A10Q9HBR0 1119 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 EPB41L5Q9HCM4 733 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 L3MBTL1Q9Y468 752 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GOLGA8TH3BQL2 631 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 E2F6O75461 281 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GOLGA8HP0CJ92 632 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 TSTA3Q13630 321 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 TRMT44Q8IYL2 757 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ANO3Q9BYT9 981 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 DISC1Q9NRI5 854 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 DDB1Q16531 1140 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 NELFCDQ8IXH7 590 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GYG2O15488 501 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ALCAMQ13740 583 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SCG3Q8WXD2 468 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 NCOA5Q9HCD5 579 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 AATFQ9NY61 560 aaKnown RBP eCLIP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GOLGA8MH3BSY2 632 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 OCM2P0CE71 109 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 OCMP0CE72 109 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ADAT2Q7Z6V5 191 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 PPM1KQ8N3J5 372 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SNX14Q9Y5W7 946 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 WDR17Q8IZU2 1322 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 KIF19Q2TAC6 998 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ANGPTL8Q6UXH0 198 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 C17orf53Q8N3J3 647 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 CPSF3Q9UKF6 684 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 DDX39AO00148 427 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 KRT37O76014 449 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 LRMPQ12912 555 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ADAM9Q13443 819 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SLC12A1Q13621 1099 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ARMCX5Q6P1M9 558 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 TUBGCP2Q9BSJ2 902 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 POLR2MP0CAP2 368 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.978e-7■■■■□ 23.4
HSPG2-203ENST00000374695 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 MYLK4Q86YV6 388 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 PITPNM3Q9BZ71 974 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 ARMT1Q9H993 441 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 APOBEC2Q9Y235 224 aaKnown RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 IFNAR2P48551 515 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 RASSF7Q02833 373 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 WDR75Q8IWA0 830 aaKnown RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 TRPC5Q9UL62 973 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 ZNF518AQ6AHZ1 1483 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 AP1B1Q10567 949 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 MORF4L2Q15014 288 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 SLC30A9Q6PML9 568 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 NCLNQ969V3 563 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 NT5C1BQ96P26 610 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 IKBKBO14920 756 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 DEAF1O75398 565 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 ANXA1P04083 346 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 METTL23Q86XA0 190 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 NR1H4Q96RI1 486 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 WARS2Q9UGM6 360 aaKnown RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 DLATP10515 647 aaKnown RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 ITGA6P23229 1130 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 JARID2Q92833 1246 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 TJP3O95049 919 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 ZC3H12BQ5HYM0 836 aaKnown RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 PPP4R3CPQ6ZMV5 832 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 TRIM67Q6ZTA4 783 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 ZSCAN10Q96SZ4 725 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 CFBP00751 764 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 GSNP06396 782 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 NCF2P19878 526 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 SMARCA1P28370 1054 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 POLGP54098 1239 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 DAB2P98082 770 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 ARHGEF25Q86VW2 580 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 C3orf20Q8ND61 904 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 KIF9Q9HAQ2 790 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 TNRQ92752 1358 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 MMEP08473 750 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 HLA-DPA1P20036 260 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 TCP11X2Q5H9J9 407 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 PDIK1LQ8N165 341 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 INTUQ9ULD6 942 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 PODXLO00592 558 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 VAMP4O75379 141 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 FOSP01100 380 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 PAPOLAP51003 745 aaKnown RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 SYT2Q8N9I0 419 aaPredicted RBP9□□□□□ -0.97
HSPG2-203ENST00000374695 MRFAP1Q9Y605 127 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 TRAPPC3LQ5T215 181 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 KIRREL3Q8IZU9 778 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 TEKT3Q9BXF9 490 aa9□□□□□ -0.97
HSPG2-203ENST00000374695 SNX25Q9H3E2 840 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms