RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 NFIBO00712 420 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 SPTLC2O15270 562 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 PPP6R2O75170 966 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
SLIRP-212ENST00000613856 ITGB8P26012 769 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 CNGA1P29973 690 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 MAPK4P31152 587 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 SREBF1P36956 1147 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 UBE2HP62256 183 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 CHST13Q8NET6 341 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 BADQ92934 168 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 TRERF1Q96PN7 1200 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 EHMT1Q9H9B1 1298 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 FBXO40Q9UH90 709 aa12.99□□□□□ -0.33
SLIRP-212ENST00000613856 DDX20Q9UHI6 824 aaKnown RBP12.99□□□□□ -0.33
SLIRP-212ENST00000613856 ZNF236Q9UL36 1845 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 WNT7AO00755 349 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 SLC25A27O95847 323 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 CFBP00751 764 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
SLIRP-212ENST00000613856 COL9A1P20849 921 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 EPHB4P54760 987 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-212ENST00000613856 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
SLIRP-212ENST00000613856 NBR1Q14596 966 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 WDR78Q5VTH9 848 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-212ENST00000613856 RIPK3Q9Y572 518 aa12.98□□□□□ -0.33
SLIRP-212ENST00000613856 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 LAD1O00515 517 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 MBD3O95983 291 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 CYP3A4P08684 503 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 FOSL2P15408 326 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 HOXA13P31271 388 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-212ENST00000613856 USP11P51784 963 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 PLS1Q14651 629 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 TBC1D5Q92609 795 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-212ENST00000613856 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
SLIRP-212ENST00000613856 ZNFX1Q9P2E3 1918 aaKnown RBP12.97□□□□□ -0.33
SLIRP-212ENST00000613856 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 DNM1LO00429 736 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 EDIL3O43854 480 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 IGHA2P01877 340 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 CYBAP13498 195 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 CYP3A7P24462 503 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 CIITAP33076 1130 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 ME1P48163 572 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 ZNF174Q15697 407 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 LETM2Q2VYF4 491 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 ARL6IP4Q66PJ3 421 aaKnown RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 SLC30A10Q6XR72 485 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 SLC39A5Q6ZMH5 540 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 CCAR1Q8IX12 1150 aaKnown RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 FERMT2Q96AC1 680 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
SLIRP-212ENST00000613856 PDLIM7Q9NR12 457 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.33
SLIRP-212ENST00000613856 REV3LO60673 3130 aa12.96□□□□□ -0.34
SLIRP-212ENST00000613856 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 NEMFO60524 1076 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 CUTAO60888 179 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 GADD45BO75293 160 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 PTPREP23469 700 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 MCM7P33993 719 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 PRPHP41219 470 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 PTGDRQ13258 359 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 GRIN2CQ14957 1233 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 KLHL40Q2TBA0 621 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 ADALQ6DHV7 355 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms