RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 VCPP55072 806 aaKnown RBP14.57□□□□□ -0.08
SHMT2-230ENST00000557427 GPM6BQ13491 265 aa14.57□□□□□ -0.08
SHMT2-230ENST00000557427 MBTPS1Q14703 1052 aa14.57□□□□□ -0.08
SHMT2-230ENST00000557427 SLFN13Q68D06 897 aa14.57□□□□□ -0.08
SHMT2-230ENST00000557427 ASCL5Q7RTU5 278 aa14.57□□□□□ -0.08
SHMT2-230ENST00000557427 NSUN3Q9H649 340 aaKnown RBP14.57□□□□□ -0.08
SHMT2-230ENST00000557427 ANAPC4Q9UJX5 808 aa14.57□□□□□ -0.08
SHMT2-230ENST00000557427 MTMR7Q9Y216 660 aa14.57□□□□□ -0.08
SHMT2-230ENST00000557427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHMT2-230ENST00000557427 HIP1O00291 1037 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 ALDH5A1P51649 535 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-230ENST00000557427 CHMP4BP1P59074 171 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 IKBKEQ14164 716 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 NSMFQ6X4W1 530 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 FBXL6Q8N531 539 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 WNT8BQ93098 351 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 IL17RAQ96F46 866 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 IL17RBQ9NRM6 502 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 STX8Q9UNK0 236 aa14.56□□□□□ -0.08
SHMT2-230ENST00000557427 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-230ENST00000557427 STXBP3O00186 592 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 KPNA6O60684 536 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 MCCP23508 829 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 STAT2P52630 851 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 ZXDAP98168 799 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 HYAL1Q12794 435 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 BAATQ14032 418 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-230ENST00000557427 PKN1Q16512 942 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 MFSD6Q6ZSS7 791 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 SESTD1Q86VW0 696 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 SUGP1Q8IWZ8 645 aaKnown RBP14.55□□□□□ -0.08
SHMT2-230ENST00000557427 CCDC155Q8N6L0 562 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 STAG1Q8WVM7 1258 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 KAT2BQ92831 832 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 ATOH1Q92858 354 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-230ENST00000557427 POP1Q99575 1024 aaKnown RBP14.55□□□□□ -0.08
SHMT2-230ENST00000557427 SYNPO2Q9UMS6 1093 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 COL4A6Q14031 1691 aa14.55□□□□□ -0.08
SHMT2-230ENST00000557427 ZNF213O14771 459 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 ORC4O43929 436 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 EFCAB14O75071 495 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 TBX10O75333 385 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 LGR5O75473 907 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 ARIH2O95376 493 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 PARNO95453 639 aaKnown RBP14.54□□□□□ -0.08
SHMT2-230ENST00000557427 GTF2F1P35269 517 aaKnown RBP eCLIP14.54□□□□□ -0.08
SHMT2-230ENST00000557427 ANAPC15P60006 121 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 TRIM71Q2Q1W2 868 aaKnown RBP14.54□□□□□ -0.08
SHMT2-230ENST00000557427 SLKQ9H2G2 1235 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-230ENST00000557427 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 MICAL3Q7RTP6 2002 aa14.54□□□□□ -0.08
SHMT2-230ENST00000557427 RIF1Q5UIP0 2472 aaKnown RBP14.54□□□□□ -0.08
SHMT2-230ENST00000557427 PROB1E7EW31 1015 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 H0Y858 1186 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 SGSM2O43147 1006 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 RGS20O76081 388 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 FGRP09769 529 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-230ENST00000557427 PPP2R5BQ15173 497 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 BRDTQ58F21 947 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-230ENST00000557427 ZNF618Q5T7W0 954 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 RASGRP2Q7LDG7 609 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 ERMP1Q7Z2K6 904 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 FAM160B2Q86V87 743 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 FBXO11Q86XK2 927 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 TMEM192Q8IY95 271 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 MYOCDQ8IZQ8 938 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 CHURC1Q8WUH1 139 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 ASIC4Q96FT7 647 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 SAMD11Q96NU1 681 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 TLR9Q9NR96 1032 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 PRR12Q9ULL5 1215 aa14.53□□□□□ -0.08
SHMT2-230ENST00000557427 NFIBO00712 420 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 NKRFO15226 690 aaKnown RBP eCLIP14.52□□□□□ -0.09
SHMT2-230ENST00000557427 LINC01565O15544 149 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 AVPR2P30518 371 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 DDIT3P35638 169 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 SLC1A4P43007 532 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 SMAD4Q13485 552 aaKnown RBP14.52□□□□□ -0.09
SHMT2-230ENST00000557427 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 KCTD1Q719H9 257 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 TBC1D10CQ8IV04 446 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 DBF4BQ8NFT6 615 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 RUFY2Q8WXA3 655 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 GMCL1Q96IK5 515 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 GTF2IRD1Q9UHL9 959 aa14.52□□□□□ -0.09
SHMT2-230ENST00000557427 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-230ENST00000557427 NLRC5Q86WI3 1866 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 RAD50Q92878 1312 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 FAM186AA6NE01 2351 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 LOC730098B7Z3J9 87 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 NCK2O43639 380 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 PLA2G6O60733 806 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
SHMT2-230ENST00000557427 AMHP03971 560 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 LINC00271P0C7V0 271 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 TXNP10599 105 aaKnown RBP14.51□□□□□ -0.09
SHMT2-230ENST00000557427 EDNRBP24530 442 aa14.51□□□□□ -0.09
SHMT2-230ENST00000557427 HIC1Q14526 733 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms