RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 INHAP05111 366 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 ARP10275 920 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 GNPTABQ3T906 1256 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 PRR16Q569H4 304 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 NLRX1Q86UT6 975 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 C4orf32Q8N8J7 132 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 ETNPPLQ8TBG4 499 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 DDX25Q9UHL0 483 aaKnown RBP20.48■□□□□ 0.87
PSEN1-208ENST00000553719 ZNF76P36508 570 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 MTMR1Q13613 665 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 SEPT14Q6ZU15 432 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 PLA2G4DQ86XP0 818 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 SH3TC2Q8TF17 1288 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 SCFD2Q8WU76 684 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 CDHR1Q96JP9 859 aa20.47■□□□□ 0.87
PSEN1-208ENST00000553719 FTOQ9C0B1 505 aaKnown RBP eCLIP20.47■□□□□ 0.87
PSEN1-208ENST00000553719 AGO4Q9HCK5 861 aaKnown RBP20.47■□□□□ 0.87
PSEN1-208ENST00000553719 DDX41Q9UJV9 622 aaKnown RBP20.47■□□□□ 0.87
PSEN1-208ENST00000553719 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-208ENST00000553719 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.46■□□□□ 0.87
PSEN1-208ENST00000553719 MSH4O15457 936 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 TGFB3P10600 412 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 KCNA2P16389 499 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 ATP2B1P20020 1258 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 ADCYAP1R1P41586 468 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 SP2Q02086 613 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 TMEM63BQ5T3F8 832 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 HAS1Q92839 578 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 MTMR9Q96QG7 549 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 USP28Q96RU2 1077 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 SENP7Q9BQF6 1050 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 TMEM60Q9H2L4 133 aa20.46■□□□□ 0.87
PSEN1-208ENST00000553719 TBX3O15119 743 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 DHX15O43143 795 aaKnown RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 NEMFO60524 1076 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 ATP9AO75110 1047 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 UBA1P22314 1058 aaKnown RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 CCND3P30281 292 aaPredicted RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 MCM7P33993 719 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 NASPP49321 788 aaPredicted RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 ITGB3BPQ13352 177 aaPredicted RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 TTLL4Q14679 1199 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 PTPAQ15257 358 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 ZNF174Q15697 407 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 SLC9C1Q4G0N8 1177 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 KCNV1Q6PIU1 500 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 SLC5A5Q92911 643 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 POLR3EQ9NVU0 708 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 GNEQ9Y223 722 aaKnown RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 MORC2Q9Y6X9 1032 aaPredicted RBP20.45■□□□□ 0.86
PSEN1-208ENST00000553719 FRMPD3Q5JV73 1810 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 DOCK5Q9H7D0 1870 aa20.45■□□□□ 0.86
PSEN1-208ENST00000553719 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 SEPT4O43236 478 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 SMPD1P17405 629 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 ATP2C1P98194 919 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-208ENST00000553719 DUSP28Q4G0W2 176 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 IQSEC1Q6DN90 963 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 ZNF333Q96JL9 665 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 CLIC4Q9Y696 253 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 MRVI1Q9Y6F6 885 aa20.44■□□□□ 0.86
PSEN1-208ENST00000553719 AKR1A1P14550 325 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 DNM1Q05193 864 aaKnown RBP20.43■□□□□ 0.86
PSEN1-208ENST00000553719 SF3A1Q15459 793 aaKnown RBP20.43■□□□□ 0.86
PSEN1-208ENST00000553719 LY6KQ17RY6 165 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 ANO1Q5XXA6 986 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 ATL3Q6DD88 541 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 B3GNT9Q6UX72 402 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 CHAMP1Q96JM3 812 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 BCAS3Q9H6U6 928 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 FAM184BQ9ULE4 1060 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 NFASCO94856 1347 aa20.43■□□□□ 0.86
PSEN1-208ENST00000553719 IPO5O00410 1097 aaKnown RBP20.42■□□□□ 0.86
PSEN1-208ENST00000553719 PSMD10O75832 226 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 TXNP10599 105 aaKnown RBP20.42■□□□□ 0.86
PSEN1-208ENST00000553719 PTGS1P23219 599 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 PTGDRQ13258 359 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 COPS5Q92905 334 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 GJA10Q969M2 543 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 EMID1Q96A84 441 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-208ENST00000553719 FAM20AQ96MK3 541 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 ZNF396Q96N95 335 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-208ENST00000553719 RIT2Q99578 217 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 ZNF577Q9BSK1 485 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 MCOLN1Q9GZU1 580 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 PAK6Q9NQU5 681 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-208ENST00000553719 ATP6V1DQ9Y5K8 247 aa20.42■□□□□ 0.86
PSEN1-208ENST00000553719 TCHHQ07283 1943 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 LAD1O00515 517 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 NKRFO15226 690 aaKnown RBP eCLIP20.41■□□□□ 0.86
PSEN1-208ENST00000553719 FARP2O94887 1054 aaPredicted RBP20.41■□□□□ 0.86
PSEN1-208ENST00000553719 BMP15O95972 392 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 OR52Z1P0C646 297 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 NKX3-2P78367 333 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 TNFAIP2Q03169 654 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 ARHGAP1Q07960 439 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 SPIRE1Q08AE8 756 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms