RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TMEM102Q8N9M5 508 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 C3orf58Q8NDZ4 430 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 CNNM3Q8NE01 707 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 KCNN1Q92952 543 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 GCC1Q96CN9 775 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 OPTNQ96CV9 577 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TBC1D31Q96DN5 1066 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ACSBG1Q96GR2 724 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 GDAP1L1Q96MZ0 367 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 JAKMIP1Q96N16 626 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TTC14Q96N46 770 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TCF12Q99081 682 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 CORO1BQ9BR76 489 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 OXCT2Q9BYC2 517 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 SEZ6LQ9BYH1 1024 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 UPF3BQ9BZI7 483 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TANGO6Q9C0B7 1094 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 BHLHE41Q9C0J9 482 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ABCB6Q9NP58 842 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 DMAP1Q9NPF5 467 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 RRP7BPQ9NSQ0 103 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 DZANK1Q9NVP4 752 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 MIS18AQ9NYP9 233 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 SEPT10Q9P0V9 454 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ZMAT5Q9UDW3 170 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TUBGCP4Q9UGJ1 667 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 PCSK1NQ9UHG2 260 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 GGT7Q9UJ14 662 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TTF2Q9UNY4 1162 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ABCA6Q8N139 1617 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 RNF17Q9BXT8 1623 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ATP7AQ04656 1500 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 DUOX2Q9NRD8 1548 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 CEP152O94986 1710 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SIGLEC1Q9BZZ2 1709 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 LRRD1A4D1F6 860 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PABPN1LA6NDY0 278 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 TBKBP1A7MCY6 615 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 STXBP3O00186 592 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SMARCA5O60264 1052 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 TBCAO75347 108 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 GSTA2P09210 222 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 U2AF1L5P0DN76 240 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 ARAFP10398 606 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 HCLS1P14317 486 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CPA3P15088 417 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 MX2P20592 715 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SYT1P21579 422 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 S100A1P23297 94 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CCNCP24863 283 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 ADH6P28332 368 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 KIF5BP33176 963 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 TCF7P36402 384 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 MAP2K3P46734 347 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CCNG1P51959 295 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 HNRNPMP52272 730 aaKnown RBP eCLIP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 U2AF1Q01081 240 aaKnown RBP eCLIP4.81□□□□□ -1.642e-12■■■□□ 16.4
SNHG1-219ENST00000542112 SLC7A5Q01650 507 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PDE4BQ07343 736 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 NSUN2Q08J23 767 aaKnown RBP eCLIP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SNX1Q13596 522 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SPIDRQ14159 915 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SEPT2Q15019 361 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 E2F5Q15329 346 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC153Q494R4 210 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PLEKHO1Q53GL0 409 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 VPS53Q5VIR6 699 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 NUTM2GQ5VZR2 741 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 FBXW10Q5XX13 1052 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC70Q6NSX1 233 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 ATF7IPQ6VMQ6 1270 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 BZW1Q7L1Q6 419 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 RSRC2Q7L4I2 434 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 MAATS1Q7Z4T9 603 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 USP48Q86UV5 1035 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 KIAA0825Q8IV33 1275 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CCAR1Q8IX12 1150 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 DRC7Q8IY82 874 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SLC43A3Q8NBI5 491 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SMC1BQ8NDV3 1235 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 KLHDC4Q8TBB5 520 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 NEK9Q8TD19 979 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 DYDC1Q8WWB3 177 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 RUBCNQ92622 972 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 TNFRSF25Q93038 417 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 NXPE3Q969Y0 559 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 TRIM11Q96F44 468 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CNTNAP3BQ96NU0 1288 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 GSDMAQ96QA5 445 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PARD6BQ9BYG5 372 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PBX4Q9BYU1 374 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CNTNAP3Q9BZ76 1288 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 UBE2OQ9C0C9 1292 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CEP44Q9C0F1 390 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 FAM192AQ9GZU8 254 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 OSBPL5Q9H0X9 879 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms