RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 EPB41L1Q9H4G0 881 aa6.84□□□□□ -1.31
SKP1-207ENST00000520417 PRICKLE3O43900 615 aaPredicted RBP6.83□□□□□ -1.32
SKP1-207ENST00000520417 DLX3O60479 287 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 ZC3H6P61129 1189 aaKnown RBP6.83□□□□□ -1.32
SKP1-207ENST00000520417 RAB33AQ14088 237 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 RTP5Q14D33 572 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 NAALADL2Q58DX5 795 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 Q8N1Y9 231 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 KYQ8NBH2 561 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 ARRDC4Q8NCT1 418 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 ZSWIM3Q96MP5 696 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 PCDH18Q9HCL0 1135 aa6.83□□□□□ -1.32
SKP1-207ENST00000520417 BLACEA4D250 179 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 MSCO60682 206 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 CNR2P34972 360 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 PRAMEF18Q5VWM3 479 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 MCTP2Q6DN12 878 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 KCNT2Q6UVM3 1135 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 NSMFQ6X4W1 530 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 LINC00482Q8N8I6 264 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 TOE1Q96GM8 510 aaKnown RBP6.82□□□□□ -1.32
SKP1-207ENST00000520417 SGSM3Q96HU1 749 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 KCNJ15Q99712 375 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 NGRNQ9NPE2 291 aaKnown RBP6.82□□□□□ -1.32
SKP1-207ENST00000520417 MYOTQ9UBF9 498 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 PPARGC1AQ9UBK2 798 aaKnown RBP6.82□□□□□ -1.32
SKP1-207ENST00000520417 ZNF652Q9Y2D9 606 aa6.82□□□□□ -1.32
SKP1-207ENST00000520417 KRIT1O00522 736 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 DDX3XO00571 662 aaKnown RBP eCLIP6.81□□□□□ -1.32
SKP1-207ENST00000520417 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
SKP1-207ENST00000520417 THBS2P35442 1172 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 ITGA1P56199 1179 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 TESK1Q15569 626 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 RGL3Q3MIN7 710 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 PRRT2Q7Z6L0 340 aaPredicted RBP6.81□□□□□ -1.32
SKP1-207ENST00000520417 ZNF761Q86XN6 746 aaPredicted RBP6.81□□□□□ -1.32
SKP1-207ENST00000520417 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
SKP1-207ENST00000520417 TTLL6Q8N841 843 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 ADAMTS17Q8TE56 1095 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.81□□□□□ -1.32
SKP1-207ENST00000520417 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 TANGO6Q9C0B7 1094 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 GPR27Q9NS67 375 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 NPFFR2Q9Y5X5 522 aa6.81□□□□□ -1.32
SKP1-207ENST00000520417 TRAV20A0A0B4J274 112 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 TCRBV5S2A0A599 114 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 NOBOXO60393 691 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 MAFKO60675 156 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 GRIN1Q05586 938 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 IFRD2Q12894 506 aaPredicted RBP6.8□□□□□ -1.32
SKP1-207ENST00000520417 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 SKOR2Q2VWA4 1001 aaPredicted RBP6.8□□□□□ -1.32
SKP1-207ENST00000520417 YOD1Q5VVQ6 348 aaPredicted RBP6.8□□□□□ -1.32
SKP1-207ENST00000520417 ST13P5Q8NFI4 369 aaPredicted RBP6.8□□□□□ -1.32
SKP1-207ENST00000520417 PIP4K2CQ8TBX8 421 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 ARHGEF4Q9NR80 690 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 DTLQ9NZJ0 730 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 CROTQ9UKG9 612 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 DUSP10Q9Y6W6 482 aa6.8□□□□□ -1.32
SKP1-207ENST00000520417 SLC27A2O14975 620 aa6.79□□□□□ -1.32
SKP1-207ENST00000520417 COL6A2P12110 1019 aa6.79□□□□□ -1.32
SKP1-207ENST00000520417 RPL13P26373 211 aaKnown RBP6.79□□□□□ -1.32
SKP1-207ENST00000520417 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
SKP1-207ENST00000520417 RBM12BQ8IXT5 1001 aaKnown RBP6.79□□□□□ -1.32
SKP1-207ENST00000520417 DCAF4Q8WV16 495 aa6.79□□□□□ -1.32
SKP1-207ENST00000520417 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
SKP1-207ENST00000520417 IGSF5Q9NSI5 407 aa6.79□□□□□ -1.32
SKP1-207ENST00000520417 TADA3O75528 432 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 CAPNS1P04632 268 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 CYP1A1P04798 512 aaPredicted RBP6.78□□□□□ -1.32
SKP1-207ENST00000520417 FGFR1P11362 822 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 GNAT1P11488 350 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 GTF2F1P35269 517 aaKnown RBP eCLIP6.78□□□□□ -1.32
SKP1-207ENST00000520417 MTERF2Q49AM1 385 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 EMC4Q5J8M3 183 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 TEPPQ6URK8 271 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 FAM124AQ86V42 546 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 CLIC6Q96NY7 704 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 CDC6Q99741 560 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 LNPKQ9C0E8 428 aa6.78□□□□□ -1.32
SKP1-207ENST00000520417 PDPK1O15530 556 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 GRK2P25098 689 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 GRK3P35626 688 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 ADAM9Q13443 819 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 NTRK3Q16288 839 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 KIZQ2M2Z5 673 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 RSPO2Q6UXX9 243 aaPredicted RBP6.77□□□□□ -1.33
SKP1-207ENST00000520417 SPATC1Q76KD6 591 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 IFNL3Q8IZI9 196 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 TXNDC5Q8NBS9 432 aaKnown RBP6.77□□□□□ -1.33
SKP1-207ENST00000520417 OSBP2Q969R2 916 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 IPO9Q96P70 1041 aaKnown RBP6.77□□□□□ -1.33
SKP1-207ENST00000520417 SPATA9Q9BWV2 254 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 L2HGDHQ9H9P8 463 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 SLC6A20Q9NP91 592 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 RBPJLQ9UBG7 517 aa6.77□□□□□ -1.33
SKP1-207ENST00000520417 MROH6A6NGR9 719 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms