RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CDK5RAP2Q96SN8 1893 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 FLT1P17948 1338 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 GLRX3O76003 335 aaKnown RBP7.37□□□□□ -1.23
PABPC1-207ENST00000518716 UBTFL1P0CB47 393 aaPredicted RBP7.37□□□□□ -1.23
PABPC1-207ENST00000518716 ADCYAP1R1P41586 468 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 CCNA1P78396 465 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 MTX1Q13505 466 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 AKNAD1Q5T1N1 836 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 ATXN2LQ8WWM7 1075 aaKnown RBP7.37□□□□□ -1.23
PABPC1-207ENST00000518716 ASB2Q96Q27 587 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 GSX2Q9BZM3 304 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 KIAA1683Q9H0B3 1180 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 ZNF576Q9H609 170 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 AKTIPQ9H8T0 292 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 BCCIPQ9P287 314 aaKnown RBP eCLIP7.37□□□□□ -1.23
PABPC1-207ENST00000518716 PALD1Q9ULE6 856 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 AKAP2Q9Y2D5 859 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 TACC3Q9Y6A5 838 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 CHD9Q3L8U1 2897 aa7.37□□□□□ -1.23
PABPC1-207ENST00000518716 FOCADQ5VW36 1801 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 ZNF236Q9UL36 1845 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 SYNGAP1Q96PV0 1343 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-207ENST00000518716 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-207ENST00000518716 STRNO43815 780 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 IGSF3O75054 1194 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 GH2P01242 217 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 VCAM1P19320 739 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 SPINK2P20155 84 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 ADORA2AP29274 412 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 CNGA1P29973 690 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 GUCY1A2P33402 732 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 MAP3K12Q12852 859 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 C16orf59Q7L2K0 433 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 ANKRD33Q7Z3H0 272 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 FAM35AQ86V20 835 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 MAPKAPK5Q8IW41 473 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 CCAR1Q8IX12 1150 aaKnown RBP7.36□□□□□ -1.23
PABPC1-207ENST00000518716 SHCBP1Q8NEM2 672 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 ACER1Q8TDN7 264 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 TGFBRAP1Q8WUH2 860 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 TOX2Q96NM4 488 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 ARID3AQ99856 593 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 MOV10L1Q9BXT6 1211 aaKnown RBP7.36□□□□□ -1.23
PABPC1-207ENST00000518716 PHACTR1Q9C0D0 580 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 PRDM5Q9NQX1 630 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-207ENST00000518716 RAI14Q9P0K7 980 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 HCN4Q9Y3Q4 1203 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 BRWD1Q9NSI6 2320 aa7.36□□□□□ -1.23
PABPC1-207ENST00000518716 ROBO3Q96MS0 1386 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 XIRP2A4UGR9 3374 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 KBTBD13C9JR72 458 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 PIK3CDO00329 1044 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 CLTBP09497 229 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 CPB1P15086 417 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 USP14P54578 494 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 FAAP100Q0VG06 881 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 ALDH1L2Q3SY69 923 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 FAM47AQ5JRC9 791 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 PRAMEF19Q5SWL8 479 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 WFDC8Q8IUA0 241 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 TRMT2AQ8IZ69 625 aaKnown RBP7.35□□□□□ -1.23
PABPC1-207ENST00000518716 ABRAQ8N0Z2 381 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 FERMT2Q96AC1 680 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 TIFAQ96CG3 184 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 RNPC3Q96LT9 517 aaKnown RBP7.35□□□□□ -1.23
PABPC1-207ENST00000518716 MEIS3Q99687 375 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 EHD4Q9H223 541 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 AATFQ9NY61 560 aaKnown RBP eCLIP7.35□□□□□ -1.23
PABPC1-207ENST00000518716 CHD7Q9P2D1 2997 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 NRBP1Q9UHY1 535 aa7.35□□□□□ -1.23
PABPC1-207ENST00000518716 PRRC2BQ5JSZ5 2229 aaKnown RBP7.35□□□□□ -1.23
PABPC1-207ENST00000518716 A0A1W2PRG0 241 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 A6NJR5 290 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 BAG3O95817 575 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 IGLV1-40P01703 118 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 CYP2E1P05181 493 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 ERCC3P19447 782 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 NFKB1P19838 968 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 SHMT1P34896 483 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 FPGSQ05932 587 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 GABPAQ06546 454 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 COG2Q14746 738 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 KIAA1755Q5JYT7 1200 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 PERM1Q5SV97 790 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 ANO1Q5XXA6 986 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 CCSAPQ6IQ19 270 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 DPP9Q86TI2 863 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 ADAMTS19Q8TE59 1207 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 FAM122AQ96E09 287 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 MAML3Q96JK9 1138 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 ZNF512BQ96KM6 892 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 SPATC1LQ9H0A9 340 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 RPAP3Q9H6T3 665 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-207ENST00000518716 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.23
PABPC1-207ENST00000518716 TBX21Q9UL17 535 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms