RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 DYRK4Q9NR20 520 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TYW1Q9NV66 732 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 DOLKQ9UPQ8 538 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 RIMBP3CA6NJZ7 1639 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 RIMBP3BA6NNM3 1639 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 RIMBP3Q9UFD9 1639 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 DENND3A2RUS2 1198 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 THAP12O43422 761 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 BUB1BO60566 1050 aaPredicted RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 PHKG2P15735 406 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 LONRF3Q496Y0 759 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CIAPIN1Q6FI81 312 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CC2D1AQ6P1N0 951 aaPredicted RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 KRT27Q7Z3Y8 459 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 RNF10Q8N5U6 811 aaKnown RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 PI4K2BQ8TCG2 481 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 URGCPQ8TCY9 931 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 STAMQ92783 540 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 IQCDQ96DY2 449 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 FAM49AQ9H0Q0 323 aaPredicted RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 TMEM131LA2VDJ0 1609 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 KLRF2D3W0D1 207 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CYP4A11Q02928 519 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 LRCH2Q5VUJ6 765 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 RSBN1LQ6PCB5 846 aaPredicted RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 CXorf38Q8TB03 319 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 KLHDC4Q8TBB5 520 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 SNX19Q92543 992 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CABS1Q96KC9 395 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 NT5C1BQ96P26 610 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 AMNQ9BXJ7 453 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 KCNH4Q9UQ05 1017 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 DIP2BQ9P265 1576 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 GYG1P46976 350 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 ARL13BQ3SXY8 428 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 FAM186BQ8IYM0 893 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 ZNF577Q9BSK1 485 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 IFIH1Q9BYX4 1025 aaKnown RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 METTL14Q9HCE5 456 aaKnown RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 KMT5AQ9NQR1 393 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 KRT82Q9NSB4 513 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 DONSONQ9NYP3 566 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 ZNF212Q9UDV6 495 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 MROH1Q8NDA8 1641 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 A6NNZ2 444 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 KIF28PB7ZC32 967 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 BAG2O95816 211 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 INHBAP08476 426 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 ATF2P15336 505 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CTSWP56202 376 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 TUBB8Q3ZCM7 444 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 TTC31Q49AM3 519 aaPredicted RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 PHLDB3Q6NSJ2 640 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 BLIDQ8IZY5 108 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 PNMA1Q8ND90 353 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 DDX17Q92841 729 aaKnown RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 RABEP2Q9H5N1 569 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 XAB2Q9HCS7 855 aaKnown RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 TLK1Q9UKI8 766 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 ATP5JP18859 108 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 MFAP3P55082 362 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 UBXN2AP68543 259 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 USPL1Q5W0Q7 1092 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 KRT40Q6A162 431 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CATSPER4Q7RTX7 472 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 NEK8Q86SG6 692 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 FBXL13Q8NEE6 735 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 PKNOX2Q96KN3 472 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 CEP170P1Q96L14 293 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 Q9H521 79 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
USP38-203ENST00000511739 HPCAL4Q9UM19 191 aa6.27□□□□□ -1.41
USP38-203ENST00000511739 SLC27A2O14975 620 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SART1O43290 800 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 MED7O43513 233 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ARHGDIAP52565 204 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 BLVRAP53004 296 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 PPP2R5EQ16537 467 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 TADA2BQ86TJ2 420 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 KBTBD3Q8NAB2 608 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 BBOF1Q8ND07 529 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 WDR48Q8TAF3 677 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SH3KBP1Q96B97 665 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 HINFPQ9BQA5 517 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 TRIM45Q9H8W5 580 aaPredicted RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 DBNDD1Q9H9R9 158 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 HACD3Q9P035 362 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 FAN1Q9Y2M0 1017 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 MROH2AA6NES4 1674 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SGK1O00141 431 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 MYO1FO00160 1098 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 CHEK2O96017 543 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 GOLGA8HP0CJ92 632 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 GSPT1P15170 499 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 KCNJ6P48051 423 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 OSTNP61366 133 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 MFSD14CQ5VZR4 134 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms