RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CYP21A2P08686 494 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 POU3F3P20264 500 aaPredicted RBP13.2□□□□□ -0.3
SIL1-208ENST00000505945 KCNJ6P48051 423 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 WDR5P61964 334 aaKnown RBP13.2□□□□□ -0.3
SIL1-208ENST00000505945 SP2Q02086 613 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 TFF2Q03403 129 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 GRM4Q14833 912 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 PGM5Q15124 567 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 SKIV2LQ15477 1246 aaKnown RBP13.2□□□□□ -0.3
SIL1-208ENST00000505945 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 TTC22Q5TAA0 569 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 IL31RAQ8NI17 732 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 TAF6LQ9Y6J9 622 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
SIL1-208ENST00000505945 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
SIL1-208ENST00000505945 CYTH3O43739 400 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
SIL1-208ENST00000505945 GGPS1O95749 300 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 CHMLP26374 656 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 DEFB103AP81534 67 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 RBL2Q08999 1139 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 PTK7Q13308 1070 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 HIC1Q14526 733 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 TCTN1Q2MV58 587 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
SIL1-208ENST00000505945 CNKSR3Q6P9H4 555 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 GPKOWQ92917 476 aaPredicted RBP eCLIP13.19□□□□□ -0.3
SIL1-208ENST00000505945 WNT8BQ93098 351 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 SPATA33Q96N06 139 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 UHRF1Q96T88 793 aaPredicted RBP13.19□□□□□ -0.3
SIL1-208ENST00000505945 ZBED2Q9BTP6 218 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
SIL1-208ENST00000505945 SUPT16HQ9Y5B9 1047 aaKnown RBP13.19□□□□□ -0.3
SIL1-208ENST00000505945 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
SIL1-208ENST00000505945 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 ERICH2A1L162 156 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 E7EWF7 191 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
SIL1-208ENST00000505945 CXCL10P02778 98 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 TGFB3P10600 412 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 HOXD8P13378 290 aaPredicted RBP13.18□□□□□ -0.3
SIL1-208ENST00000505945 BMP1P13497 986 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 UBA1P22314 1058 aaKnown RBP13.18□□□□□ -0.3
SIL1-208ENST00000505945 CCND2P30279 289 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 TROAPQ12815 778 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 WTAPQ15007 396 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
SIL1-208ENST00000505945 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 NECAB3Q96P71 396 aaPredicted RBP13.18□□□□□ -0.3
SIL1-208ENST00000505945 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
SIL1-208ENST00000505945 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 ABHD14A-ACY1A0A1B0GW23 586 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 KCNQ1P51787 676 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 TRAF1Q13077 416 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 GRB10Q13322 594 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 MBTPS1Q14703 1052 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 TRAF7Q6Q0C0 670 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 RALYLQ86SE5 291 aaKnown RBP13.17□□□□□ -0.3
SIL1-208ENST00000505945 NCOA7Q8NI08 942 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 C16orf70Q9BSU1 422 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
SIL1-208ENST00000505945 H3BRB1 525 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 LPXNO60711 386 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 ANTXR2P58335 489 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
SIL1-208ENST00000505945 IKBKEQ14164 716 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 SART3Q15020 963 aaKnown RBP13.16□□□□□ -0.3
SIL1-208ENST00000505945 AAK1Q2M2I8 961 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 FAM117BQ6P1L5 589 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
SIL1-208ENST00000505945 TUT1Q9H6E5 874 aaKnown RBP13.16□□□□□ -0.3
SIL1-208ENST00000505945 SGSM2O43147 1006 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 LGR5O75473 907 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 GJB5O95377 273 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 THPOP40225 353 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
SIL1-208ENST00000505945 CATIPQ7Z7H3 387 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 SERINC5Q86VE9 423 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 RAD9AQ99638 391 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 MTUS1Q9ULD2 1270 aa13.15□□□□□ -0.3
SIL1-208ENST00000505945 C17orf102A2RUQ5 167 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 RSPH10B2B2RC85 870 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 SPATA31C2B4DYI2 1134 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
SIL1-208ENST00000505945 TREHO43280 583 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 EFCAB14O75071 495 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 LGALS2P05162 132 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms