RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TTC19Q6DKK2 380 aaPredicted RBP18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 SERPINI1Q99574 410 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 ATP2B4P23634 1241 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 RSBN1LQ6PCB5 846 aaPredicted RBP18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 POLA2Q14181 598 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 PANX2Q96RD6 677 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 ANKRD12Q6UB98 2062 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 EXOC4Q96A65 974 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 SEPT9Q9UHD8 586 aaPredicted RBP18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 MYH8P13535 1937 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ADCY10Q96PN6 1610 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 SEMA3EO15041 775 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ECEL1O95672 775 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ALAS1P13196 640 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 RBL2Q08999 1139 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 P2RX5Q93086 422 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF408Q9H9D4 720 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 SCOCQ9UIL1 159 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 C4orf50Q6ZRC1 276 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 FAM193BQ96PV7 902 aaPredicted RBP18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 LSG1Q9H089 658 aaKnown RBP18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 TMEM206Q9H813 350 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 SERPING1P05155 500 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 NAA35Q5VZE5 725 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ANGPTL2Q9UKU9 493 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 hCG_1984214I3L0E3 225 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 IFNAR2P48551 515 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 RFX6Q8HWS3 928 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF713Q8N859 430 aaPredicted RBP18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF653Q96CK0 615 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 EDC3Q96F86 508 aaKnown RBP18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 IQCB1Q15051 598 aa18.9■□□□□ 0.62
NOTCH3-201ENST00000263388 MYH7P12883 1935 aa18.89■□□□□ 0.62
NOTCH3-201ENST00000263388 MAN1A2O60476 641 aa18.89■□□□□ 0.62
NOTCH3-201ENST00000263388 SUGCTQ9HAC7 445 aa18.89■□□□□ 0.62
NOTCH3-201ENST00000263388 GNGT2O14610 69 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 SRRM1Q8IYB3 904 aaKnown RBP18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 ACTR5Q9H9F9 607 aaPredicted RBP18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 NRBP2Q9NSY0 501 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 HEXIM1O94992 359 aaKnown RBP18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 CALR3Q96L12 384 aaKnown RBP18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 CHD1O14646 1710 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 KCTD6Q8NC69 237 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 TCP11Q8WWU5 503 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 EAF2Q96CJ1 260 aaPredicted RBP18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 SKIP12755 728 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 BCAMP50895 628 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 PSMD2Q13200 908 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 KLC3Q6P597 504 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 PKP1Q13835 747 aa18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 MYH9P35579 1960 aaKnown RBP18.89■□□□□ 0.61
NOTCH3-201ENST00000263388 RAP1GDS1P52306 607 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 FGFR1OP2Q9NVK5 253 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 ENC1O14682 589 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 MAP3K7O43318 606 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 RFX1P22670 979 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 MAP4K1Q92918 833 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 LRRN2O75325 713 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 CASP2P42575 452 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 ART3Q13508 389 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 C6orf118Q5T5N4 469 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 CCDC17Q96LX7 622 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 ZFYVE16Q7Z3T8 1539 aa18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 LRRC23Q53EV4 343 aaPredicted RBP18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 IPO5O00410 1097 aaKnown RBP18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.88■□□□□ 0.61
NOTCH3-201ENST00000263388 PCCAP05165 728 aaPredicted RBP18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 FAM186BQ8IYM0 893 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 ADCY2Q08462 1091 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 DPCR1Q3MIW9 517 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 DCLK2Q8N568 766 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 ANGPTL3Q9Y5C1 460 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 EXOC1LA0A1B0GW35 172 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 DNAJC10Q8IXB1 793 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 SLC7A3Q8WY07 619 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 ACCSQ96QU6 501 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 NHEJ1Q9H9Q4 299 aaPredicted RBP18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 LRRC63Q05C16 580 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 VGLL3A8MV65 326 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 MAPK13O15264 365 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 PDE8BO95263 885 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 GYG1P46976 350 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 STAT2P52630 851 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 TTC25Q96NG3 672 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 SLC12A6Q9UHW9 1150 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 TEKT2Q9UIF3 430 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 ZMYM1Q5SVZ6 1142 aa18.87■□□□□ 0.61
NOTCH3-201ENST00000263388 LCA5Q86VQ0 697 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms