RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 DOCK5Q9H7D0 1870 aa12.04□□□□□ -0.48
VPS50-201ENST00000251739 MICAL3Q7RTP6 2002 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 GH1P01241 217 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 PARP1P09874 1014 aaKnown RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 IQCF3P0C7M6 154 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 HOXD8P13378 290 aaPredicted RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 MYOGP15173 224 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 MLLT3P42568 568 aaPredicted RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 HSD17B4P51659 736 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 RABGGTBP53611 331 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 GPNMBQ14956 572 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 STAG2Q8N3U4 1231 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 SYMPKQ92797 1274 aaKnown RBP12.03□□□□□ -0.48
VPS50-201ENST00000251739 RMDN3Q96TC7 470 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 KRT23Q9C075 422 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 CTNNA3Q9UI47 895 aa12.03□□□□□ -0.48
VPS50-201ENST00000251739 SIP14410 1827 aa12.02□□□□□ -0.48
VPS50-201ENST00000251739 RGS20O76081 388 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 STXBP2Q15833 593 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 LY6KQ17RY6 165 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 FAM47CQ5HY64 1035 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 DEFB128Q7Z7B8 93 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 MCF2L2Q86YR7 1114 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 DHX38Q92620 1227 aaKnown RBP12.02□□□□□ -0.49
VPS50-201ENST00000251739 DDX12PQ92771 950 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 SLC9A7Q96T83 725 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 PXMP2Q9NR77 195 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
VPS50-201ENST00000251739 DDX41Q9UJV9 622 aaKnown RBP12.02□□□□□ -0.49
VPS50-201ENST00000251739 MRPL11Q9Y3B7 192 aaKnown RBP12.02□□□□□ -0.49
VPS50-201ENST00000251739 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 PALM3A6NDB9 673 aaPredicted RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 HAS3O00219 553 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 EIF3JO75822 258 aaKnown RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 F2P00734 622 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 NR3C2P08235 984 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 EIF2AK2P19525 551 aaKnown RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 POU3F3P20264 500 aaPredicted RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 BFSP2Q13515 415 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 SEPT14Q6ZU15 432 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 CYB5R4Q7L1T6 521 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 CAGE1Q8TC20 777 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 PHOSPHO2Q8TCD6 241 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 AFAP1L1Q8TED9 768 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 ATXN2LQ8WWM7 1075 aaKnown RBP12.01□□□□□ -0.49
VPS50-201ENST00000251739 UBAC1Q9BSL1 405 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 THEGQ9P2T0 379 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
VPS50-201ENST00000251739 KLRF2D3W0D1 207 aa12□□□□□ -0.49
VPS50-201ENST00000251739 ZBTB5O15062 677 aa12□□□□□ -0.49
VPS50-201ENST00000251739 BAIAP3O94812 1187 aa12□□□□□ -0.49
VPS50-201ENST00000251739 CXCL10P02778 98 aa12□□□□□ -0.49
VPS50-201ENST00000251739 CA3P07451 260 aa12□□□□□ -0.49
VPS50-201ENST00000251739 ACTN1P12814 892 aa12□□□□□ -0.49
VPS50-201ENST00000251739 PTGISQ16647 500 aa12□□□□□ -0.49
VPS50-201ENST00000251739 IFIT1BQ5T764 474 aaKnown RBP12□□□□□ -0.49
VPS50-201ENST00000251739 TTC22Q5TAA0 569 aa12□□□□□ -0.49
VPS50-201ENST00000251739 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
VPS50-201ENST00000251739 HERC6Q8IVU3 1022 aa12□□□□□ -0.49
VPS50-201ENST00000251739 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
VPS50-201ENST00000251739 IL31RAQ8NI17 732 aa12□□□□□ -0.49
VPS50-201ENST00000251739 PPTC7Q8NI37 304 aa12□□□□□ -0.49
VPS50-201ENST00000251739 EPAS1Q99814 870 aa12□□□□□ -0.49
VPS50-201ENST00000251739 PDCD2LQ9BRP1 358 aa12□□□□□ -0.49
VPS50-201ENST00000251739 MAP3K20Q9NYL2 800 aaKnown RBP12□□□□□ -0.49
VPS50-201ENST00000251739 GTF2IRD1Q9UHL9 959 aa12□□□□□ -0.49
VPS50-201ENST00000251739 TAF6LQ9Y6J9 622 aa12□□□□□ -0.49
VPS50-201ENST00000251739 FRMPD4Q14CM0 1322 aa12□□□□□ -0.49
VPS50-201ENST00000251739 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 CFBP00751 764 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 CYP21A2P08686 494 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 SELPP16109 830 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
VPS50-201ENST00000251739 TAP1Q03518 808 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 TROAPQ12815 778 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 GRM4Q14833 912 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 DGKDQ16760 1214 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 TRIM71Q2Q1W2 868 aaKnown RBP11.99□□□□□ -0.49
VPS50-201ENST00000251739 TMEM67Q5HYA8 995 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
VPS50-201ENST00000251739 ARHGEF16Q5VV41 709 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 SAMD3Q8N6K7 520 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 CCDC155Q8N6L0 562 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 RETREG2Q8NC44 543 aa11.99□□□□□ -0.49
VPS50-201ENST00000251739 ASB2Q96Q27 587 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms